PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69271.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 583aa MW: 62956 Da PI: 9.8756

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.6e-05	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H PON69271.1 83 FICEICNKGFQRDQNLQLHRRGH 105 89*******************88 PP
2	zf-C2H2	12.5	0.00044	160	182	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ PON69271.1 160 WKCEKCSKKYAVQSDWKAHSKTC 182 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MAGTEGFSVS SSHINGWFGH HQQEPSPNDT STSPKPNPNP NPASKKKRNL PGTPGNYIYF 60 ITLNPDAEVI ALSPKTLMAT NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRTNKDQV 120 KKKVYICPEK TCVHHDRARA LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VQSDWKAHSK 180 TCGTREYKCD CGTLFSRKDS FITHRAFCDA LAEESARLTS VVSANLSFGN NNVHHSNMIN 240 INNSSSTTST MANIPHHLTD HILPPGLVAS GCGVQDYGPN SHGFQLQDFN INGDQFHKPR 300 LSLWLNQVNN SNIPVDHIQG NSNFYNVPEM VQNMGSASST TTLFGSSSSS MSSYGNSNHL 360 VGFDNQKSAS TTIPNLSLSP LQVGLKEGGA NRLYSSSSEK AQNSSSKPIA PMSATALLQK 420 AAQMGSTRSS NNPSFFGSSS SGVMIMSSSS SSSSSSSPSS SVSATTTTTS TATMNFNSLN 480 QNRNVNVANM VDHNHGYLDG SNLSNISSNG LNQLVLMQKS GGTIGKASDQ PVLKLINPSS 540 NGIENGLTRD FLGSGSGGEI SQRQFLSHSI GSAMGLSQFT GNH

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MAGTEGFSVS SSHINGWFGH HQQEPSPNDT STSPKPNPNP NPASKKKRNL PGTPGNYIYF  60
ITLNPDAEVI ALSPKTLMAT NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRTNKDQV  120
KKKVYICPEK TCVHHDRARA LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VQSDWKAHSK  180
TCGTREYKCD CGTLFSRKDS FITHRAFCDA LAEESARLTS VVSANLSFGN NNVHHSNMIN  240
INNSSSTTST MANIPHHLTD HILPPGLVAS GCGVQDYGPN SHGFQLQDFN INGDQFHKPR  300
LSLWLNQVNN SNIPVDHIQG NSNFYNVPEM VQNMGSASST TTLFGSSSSS MSSYGNSNHL  360
VGFDNQKSAS TTIPNLSLSP LQVGLKEGGA NRLYSSSSEK AQNSSSKPIA PMSATALLQK  420
AAQMGSTRSS NNPSFFGSSS SGVMIMSSSS SSSSSSSPSS SVSATTTTTS TATMNFNSLN  480
QNRNVNVANM VDHNHGYLDG SNLSNISSNG LNQLVLMQKS GGTIGKASDQ PVLKLINPSS  540
NGIENGLTRD FLGSGSGGEI SQRQFLSHSI GSAMGLSQFT GNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	7e-96	C2H2 family protein