PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON69252.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family S1Fa-like
Protein Properties Length: 82aa    MW: 9030.71 Da    PI: 10.7666
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON69252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA134.91.9e-421782570
        S1FA  5 kveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                 + akG+nPGlivllvv glllvflvgn++ly+yaqknlPPrkkkPvskkklk+e+lkqGv++PGe
  PON69252.1 17 DAGAKGFNPGLIVLLVVFGLLLVFLVGNFVLYTYAQKNLPPRKKKPVSKKKLKKERLKQGVSAPGE 82
                5679*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MDDDFASRVP PSFDRADAGA KGFNPGLIVL LVVFGLLLVF LVGNFVLYTY AQKNLPPRKK  60
KPVSKKKLKK ERLKQGVSAP GE