PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON68889.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 536aa MW: 59562.2 Da PI: 9.0104 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.2 | 6.4e-05 | 104 | 124 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk F ++ L H+++H PON68889.1 104 CRECGKGFQSWKALFGHMKRH 124 9*******************9 PP | |||||||
2 | zf-C2H2 | 12.3 | 0.00051 | 448 | 470 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+Fs+ L H r+H PON68889.1 448 HECPICLKVFSSGQALGGHKRSH 470 79******************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MEEGREFKHA CKFCNKSFPC GRSLGGHMRS HLTNNSAETN EKLSKRSKIL SINNGGGGSK 60 TSHNEACFEA GPNLSYGLRE KPKKTWRFAD SSTEVTSVFE NKLCRECGKG FQSWKALFGH 120 MKRHSEKERA SMNNSSEEQD SWTIANQKMV VDSQSDNETT TPNRKRRSKR RTRYMGTTNS 180 SSFSVVNNGS SSVSEIELEQ EEVAMCLMML SRDGNYWVGS KSVAETSDNF SESSNAPSSK 240 NAGKTSGTDG SEISKSKKLN AKTNEHGKLD SGFSKLWSRM NGTEVKDKIK MKFQKDESQF 300 DQLGSKKYLN SSKRSLDHAH YDPELRSDSL KKLVPDVSDR GMCKISHKRS KFECTTCNKV 360 FHSYQALGGH RASHKKTKGC FASIIDSSEY SIETDNISPE PTADDDHHHH HKNLIHHHDT 420 PDAGDDRKSD REVEKISTVV SKKSSKGHEC PICLKVFSSG QALGGHKRSH LIGANSDAKS 480 SQAIVIEKPI PGIRDFLDLN LPAPDEEDSN GHVASLKPWW AGTTHKHEAL VGLISN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26610.1 | 1e-34 | C2H2 family protein |