PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68889.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 536aa    MW: 59562.2 Da    PI: 9.0104
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.4e-05104124323
                 ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                 C  Cgk F ++  L  H+++H
  PON68889.1 104 CRECGKGFQSWKALFGHMKRH 124
                 9*******************9 PP

2zf-C2H212.30.00051448470123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp+C k+Fs+   L  H r+H
  PON68889.1 448 HECPICLKVFSSGQALGGHKRSH 470
                 79******************999 PP

Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    
MEEGREFKHA CKFCNKSFPC GRSLGGHMRS HLTNNSAETN EKLSKRSKIL SINNGGGGSK  60
TSHNEACFEA GPNLSYGLRE KPKKTWRFAD SSTEVTSVFE NKLCRECGKG FQSWKALFGH  120
MKRHSEKERA SMNNSSEEQD SWTIANQKMV VDSQSDNETT TPNRKRRSKR RTRYMGTTNS  180
SSFSVVNNGS SSVSEIELEQ EEVAMCLMML SRDGNYWVGS KSVAETSDNF SESSNAPSSK  240
NAGKTSGTDG SEISKSKKLN AKTNEHGKLD SGFSKLWSRM NGTEVKDKIK MKFQKDESQF  300
DQLGSKKYLN SSKRSLDHAH YDPELRSDSL KKLVPDVSDR GMCKISHKRS KFECTTCNKV  360
FHSYQALGGH RASHKKTKGC FASIIDSSEY SIETDNISPE PTADDDHHHH HKNLIHHHDT  420
PDAGDDRKSD REVEKISTVV SKKSSKGHEC PICLKVFSSG QALGGHKRSH LIGANSDAKS  480
SQAIVIEKPI PGIRDFLDLN LPAPDEEDSN GHVASLKPWW AGTTHKHEAL VGLISN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.11e-34C2H2 family protein