PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68634.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 358aa    MW: 40577.7 Da    PI: 4.8324
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68634.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF47.62.1e-152563745
                HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                sn  v+fskRr+g++ KA EL++ C a++a++++s+tg+
  PON68634.1 25 SNIFVSFSKRRKGLFQKAAELCTKCHAQIAIVVLSPTGN 63
                6677*********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAKRSRDNSS MEEEQEQERA QLQASNIFVS FSKRRKGLFQ KAAELCTKCH AQIAIVVLSP  60
TGNPFSFGHS SVDDVLRHYL SNTTMGPPNF ITDEHRNQTQ RIEGLKFSLK QKKPQINDRE  120
TRVVSELKRW VERECEERKT VAELEFLREK FNNLLGKITQ RLASSSTTCL GGGGEKDQGF  180
DSVCPMSTEF VQIDNMFQHF NTASNLDLGF VDHPINDMSY TKYGTSSNFP LNGFTCQNRF  240
QFHSSDLEFL GHPLNDVLYA NDVGPSSSRG DAGSHADDGF NCQTNADFIT SNDMFQFTSS  300
DLEFLDHSLN DISYANYGFT FQDNDFVGND NIYQFNSSNL EFLDYPLNAT WYASCYGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-20M-type_MADS family protein