PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON68338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24531.1 Da PI: 4.9698 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.2e-19 | 17 | 65 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+Wv+eIr+p gk++r++lg++ t+e+Aa+a++ a++ l+g PON68338.1 17 YRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYETPEMAAAAYDVAALHLRG 65 9****999.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MEQVLESAFS HVAPPAYRGV RKRKWGKWVS EIREPGKKTR IWLGSYETPE MAAAAYDVAA 60 LHLRGRGARL NFPELAEGLP RPATSRAEDV QVAAQKAAMR FRRAPIRVSS EEMETEDAQN 120 DMSFGGSSSS SSSSDSTGGA ESHEGHYSVP VTVGLSPSQI QAINDSPLDS PKMTWMQTAG 180 AVLFGDQNQY CYYSSTSHHV LLNDDVEFCD FEEIQHDSIW DN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33760.1 | 2e-47 | ERF family protein |