PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON67708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 537aa MW: 55775.6 Da PI: 8.959 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.3e-05 | 66 | 88 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H PON67708.1 66 FICEICNKGFQRDQNLQLHRRGH 88 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.1 | 0.0012 | 142 | 164 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + PON67708.1 142 WKCDKCSKKYAVQSDWKAHSKIC 164 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 537 aa Download sequence |
MPTELDNSST ASGEASVSSS GNQTGPTPAP PPKSAAKKKR NLPGMPDPDA EVIALSPKAL 60 LATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLRQRSSK EVKKRVYVCP ELTCVHHDPS 120 RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFSRR 180 DSFITHRAFC DALAEESAKT QNPTPAQNQT SAQNQTQTAG NMKSESETQV RTVKSSSPPP 240 PPAPLVAPAA PPSSSVPSGP PQSTGLLSSS LPIQTPVIAE LPENPPRPLE EAPSAATGLS 300 GSSSSSTTSS SSNGSTSSTV FASLFASSTT SASLQPPQPT AFTDLIRAMS RPDCPTDLAP 360 SSSLEPISLG LSTSHGSSIF GTGGQERRQY APPPQPAMSA TALLQKAAQM GAAATNASLL 420 RGLGIVSSSS SSGPQENLQW PQRLVEPDSN SAPPGLGLGL PCDGSSGLKE LMMGTPSMFG 480 PKQTTLDFLG LGMAAGGTPS GGLSALITSI GGGLDVAAAA ASFGGGEFSG KDIGRSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-104 | C2H2 family protein |