PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67708.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 537aa    MW: 55775.6 Da    PI: 8.959
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.3e-056688123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C++C+k F r  nL+ H r H
  PON67708.1 66 FICEICNKGFQRDQNLQLHRRGH 88
                89*******************88 PP

2zf-C2H211.10.0012142164123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC +C+k +  +s+ k H + +
  PON67708.1 142 WKCDKCSKKYAVQSDWKAHSKIC 164
                 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MPTELDNSST ASGEASVSSS GNQTGPTPAP PPKSAAKKKR NLPGMPDPDA EVIALSPKAL  60
LATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLRQRSSK EVKKRVYVCP ELTCVHHDPS  120
RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFSRR  180
DSFITHRAFC DALAEESAKT QNPTPAQNQT SAQNQTQTAG NMKSESETQV RTVKSSSPPP  240
PPAPLVAPAA PPSSSVPSGP PQSTGLLSSS LPIQTPVIAE LPENPPRPLE EAPSAATGLS  300
GSSSSSTTSS SSNGSTSSTV FASLFASSTT SASLQPPQPT AFTDLIRAMS RPDCPTDLAP  360
SSSLEPISLG LSTSHGSSIF GTGGQERRQY APPPQPAMSA TALLQKAAQM GAAATNASLL  420
RGLGIVSSSS SSGPQENLQW PQRLVEPDSN SAPPGLGLGL PCDGSSGLKE LMMGTPSMFG  480
PKQTTLDFLG LGMAAGGTPS GGLSALITSI GGGLDVAAAA ASFGGGEFSG KDIGRSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50700.11e-104C2H2 family protein