PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67232.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ARF
Protein Properties Length: 848aa    MW: 94584.3 Da    PI: 6.8653
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.99.6e-24150251199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+
  PON67232.1 150 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELR 245
                 99*****************************7333.34459************************************************..449999** PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 v+v+r+
  PON67232.1 246 VGVRRA 251
                 ***996 PP
2Auxin_resp1187.8e-39276358183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+st+++F+v+Y+Pr+s++eF+v+++++++a k+++s+GmRfkm+fe+e+++e+r++Gt++g++++dp rW++SkWr+Lk
  PON67232.1 276 AWHATSTGTMFTVYYKPRTSPAEFIVPFDQYMEANKNNYSIGMRFKMRFEGEEAPEQRFTGTIIGIEEADPKRWKDSKWRCLK 358
                 79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    
MASSEVSVKG NSGNPMGESF SSSFADHNDA TKAAEARKDA DVALYKELWH ACAGPLVTVP  60
REGERVFYFP QGHIEQVEAS TNQVADQQMP LYNLPPKILC QVINVELKAE PDTDEVFAQI  120
ILLPEQNQDE NAVEKVSTPP PPSRFQVHSF CKTLTASDTS THGGFSVLRR HADECLPPLD  180
MSRQPPTQEL VAKDLHGNEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA GDAFIFLRGE  240
NGELRVGVRR AMRKQDNVPS SVISSHSMHL GVLATAWHAT STGTMFTVYY KPRTSPAEFI  300
VPFDQYMEAN KNNYSIGMRF KMRFEGEEAP EQRFTGTIIG IEEADPKRWK DSKWRCLKVR  360
WDETSTIPRP ERVSPWKIEP ALAPPALNPL PVPRSKRPRS NVVPSSPDSS VLTREGSSKV  420
TVDPSLPSGF SRVLQGQEFS ILRGNLAESN DSDTAEKSVM WPPSLDDEKI DVVSASKRYG  480
SENWVPSGRH EPTYTDLLSG LGATADSSRV ICPSFTVQSV TPANSMRKHS LDQEGRFNLH  540
CSPRSMIPSS LSLSLDTNLK SSVQSGNIPY QRQGDVRYGG FDDRTILHSH RVEHPQGNWF  600
MPPPSNSHFE NPSYSRELTS KPLLGQKYEA VKPKDGNCKI FGYSLIAPEP AVSHRSIVDK  660
ATGQMNLLPN QAHTFEFDHK SEQVRGSKLA DNPVAGIVQE RSSHTNQQHS GELQGKAQSG  720
STRSCTKVHK QGIALGRSVD LTKFNNYVEL IAELDQLFEF GGELMAPKKN WLIVYTDDEG  780
DMMLVGDDPW QEFCCMVRKI FIYTREEVQK MSPGTLNSHG DGNHTVAEVM DAKEKSQPLP  840
LSSVPENY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein