PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67210.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LFY
Protein Properties Length: 493aa    MW: 55329.2 Da    PI: 6.7566
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY356.45e-10913171281
     FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrl 99 
                 mdp+ f+aslfkwdpr  +++  a++   + v++a+  +aa+  ar++ +leelf+ayG+ry+tvakiaelGftv tLv+m+deeldd+m+sls+ifr+
  PON67210.1   1 MDPDPFTASLFKWDPRGLVSP--ATVGAPQLVPAAA-YVAASRPAREFGGLEELFQAYGIRYYTVAKIAELGFTVRTLVNMRDEELDDMMNSLSHIFRW 96 
                 9***************98744..4555555555554.667778889999************************************************** PP

     FLO_LFY 100 dllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaags...ggeglgeaelvaaeekkseeekkkaskkkqkr 195
                 +llvGeryGikaavraerrrle++ + ++rr   ++  ++++dalsqeglseepvq+eke++gs   gg+  g++++++++++++ ++++++ +kkqkr
  PON67210.1  97 ELLVGERYGIKAAVRAERRRLEDDYDFSRRRS--ADTPTNVIDALSQEGLSEEPVQQEKEMVGSgggGGGVGGRWDQMVTAAAERRNNSNNN-NKKQKR 192
                 ***********************888888883..4444569*******************99994443334467777766654433333333.334444 PP

     FLO_LFY 196 kkkkelkse......................ededeeeeededeeg.................sgedgeerqrehPfivtepgevargkknGLDYLfdL 255
                 +++k ++ +                      ede++++++d+de++                 + + + erqrehPfivtepgevargkknGLDYLf+L
  PON67210.1 193 RSSKGAHRRvvavdhnnnihelvndmndvaaEDEEDDDDDDDDEDNvvfgkgsgrggsssttdHHRMSCERQREHPFIVTEPGEVARGKKNGLDYLFHL 291
                 4444433335678999**********9999745554444444444478888877776665544334444****************************** PP

     FLO_LFY 256 yeqCrefLlqvqkiakerGekcPtkv 281
                 yeqCr+fL+qvq+iakerG+kcPtk 
  PON67210.1 292 YEQCRDFLIQVQNIAKERGDKCPTKL 317
                 *************************6 PP
2FLO_LFY232.71.9e-71366471281385
     FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarq.gwdidavfnahprLsiWYvPtkLrqLC 378
                 vtn+vfryakkagas+inkPkmrhYvhCYalhcLde+ snalrra+kergenvGawrqacykplvaiaarq +wdid++fnahprLsiWYvPtkLrqLC
  PON67210.1 366 VTNEVFRYAKKAGASHINKPKMRHYVHCYALHCLDEDGSNALRRAYKERGENVGAWRQACYKPLVAIAARQaAWDIDSIFNAHPRLSIWYVPTKLRQLC 464
                 9******************************************************************987637************************** PP

     FLO_LFY 379 hlerska 385
                 h+er++a
  PON67210.1 465 HAERNAA 471
                 ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
MDPDPFTASL FKWDPRGLVS PATVGAPQLV PAAAYVAASR PAREFGGLEE LFQAYGIRYY  60
TVAKIAELGF TVRTLVNMRD EELDDMMNSL SHIFRWELLV GERYGIKAAV RAERRRLEDD  120
YDFSRRRSAD TPTNVIDALS QEGLSEEPVQ QEKEMVGSGG GGGGVGGRWD QMVTAAAERR  180
NNSNNNNKKQ KRRSSKGAHR RVVAVDHNNN IHELVNDMND VAAEDEEDDD DDDDDEDNVV  240
FGKGSGRGGS SSTTDHHRMS CERQREHPFI VTEPGEVARG KKNGLDYLFH LYEQCRDFLI  300
QVQNIAKERG DKCPTKLIGL LSLLVLKCSV GQWSYFREDY LSVLLFLSFT VLLRHVEPPA  360
FDSLPVTNEV FRYAKKAGAS HINKPKMRHY VHCYALHCLD EDGSNALRRA YKERGENVGA  420
WRQACYKPLV AIAARQAAWD IDSIFNAHPR LSIWYVPTKL RQLCHAERNA AVTPPMLTSA  480
TACSASAAHH LTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.12e-92LFY family protein