PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON66733.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 498aa    MW: 55295.1 Da    PI: 5.8215
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON66733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS293.36.3e-90654952373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaal.............. 81 
                 ++lL++cA+a++++d +laq++L+ l+++a pdgd++qRl++ f+ AL +r ar++ ++ k l+++ t+++                            
  PON66733.1  65 EQLLVHCANAIEANDVTLAQQILWVLNNIAPPDGDSNQRLTSAFLSALISRAARTGGSCIKMLASTFTRPMIpvqpqN-----DIdldvrfhvgalphr 158
                 79*********************************************************9999888888776544321.....2234466777788888 PP

        GRAS  82 ......klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg....skeeleetgerLakfA 169
                        +f +++P+++f++ +aN aIleaveg + vH++D++ ++++Q p+L +a+asR  e pp +++T+ ++ + +       ++ e+g rL +fA
  PON66733.1 159 fsvidfATFIDLTPWHRFGFTAANAAILEAVEGFSVVHVVDLSSTHCMQIPTLVDAIASRHyEVPPLIKLTVAAETDDVvppiLDISYDELGLRLVNFA 257
                 88887777*****************************************************77899********97777999888999*********** PP

        GRAS 170 eelgvpfefnvl...vakrledleleeLrvkp.......gEalaVnlvlqlhrll..........................desvsleserdevLklvk 232
                 ++ ++ +ef+v+    ++ +++l +++Lrv++        Eal++n++++lh+++                           +s+s+ s r+ +Lk ++
  PON66733.1 258 RSRNIMLEFRVVpstSSDGFACL-IDHLRVQHlvnypetTEALVINCHMMLHYIPeetlndvslhattttttttttpptttTSSTSTCSLRSMFLKSIR 355
                 ***********988533345555.566655555555699***************************************99978888888999******* PP

        GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplse 331
                 sl P+vvv+v+++ad++s++++ r+ +a+++ +  +d++++ lp+ s++r+++E+  + ++i+nv+a+ega+r+er e ++kW +r+++a F++v ++e
  PON66733.1 356 SLDPNVVVLVDEDADLTSNNLVCRLRSAFNFLWIPYDTVDTFLPKGSKQRQWYEAD-ICWKIENVIANEGAQRVERLEPKSKWVQRMRNANFRSVGFGE 453
                 ********************************************************.****************************************** PP

        GRAS 332 kaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaW 373
                 +a++++k++l +++  g+ ++ e+++ lvl+Wk++++v++++W
  PON66733.1 454 DAVSEVKSMLDEHA-AGWGLKkEDEDHLVLTWKGHNVVFATVW 495
                 **************.55666536788999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MMQFTTTTAT ATHESPSSTS PLLFPPILCN NLPIMNKTQP GRGRPWPGFP TSKALGSFGD  60
ANCMEQLLVH CANAIEANDV TLAQQILWVL NNIAPPDGDS NQRLTSAFLS ALISRAARTG  120
GSCIKMLAST FTRPMIPVQP QNDIDLDVRF HVGALPHRFS VIDFATFIDL TPWHRFGFTA  180
ANAAILEAVE GFSVVHVVDL SSTHCMQIPT LVDAIASRHY EVPPLIKLTV AAETDDVVPP  240
ILDISYDELG LRLVNFARSR NIMLEFRVVP STSSDGFACL IDHLRVQHLV NYPETTEALV  300
INCHMMLHYI PEETLNDVSL HATTTTTTTT TTPPTTTTSS TSTCSLRSMF LKSIRSLDPN  360
VVVLVDEDAD LTSNNLVCRL RSAFNFLWIP YDTVDTFLPK GSKQRQWYEA DICWKIENVI  420
ANEGAQRVER LEPKSKWVQR MRNANFRSVG FGEDAVSEVK SMLDEHAAGW GLKKEDEDHL  480
VLTWKGHNVV FATVWMPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-180GRAS family protein