PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66561.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 579aa MW: 65631.6 Da PI: 5.1056

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.7	3.5e-10	456	504	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT+eE +lv++v q G g W+ I r + +Rt ++k++w+++l PON66561.1 456 SWTPEEVVKLVEGVSQCGVGKWTEIKRLLFsssSHRTSVDLKDKWRNLL 504 5**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MFSCKPYEVD SDMPIFPVSE DEPLGLEHFL VEPLRKEDWV GDLLDLDAFQ IEKCFNIEDI 60 SGTFDYDQIK LDAGREERSE WHGVVIPFTS NDAAYPKLTK GEGENLKMSS EKLQGINISV 120 REEYPTDTKC TDEACNLDYS TCKESCLGNG GLENQFQGSL KRDTGDAMVD LTSTNIPMLK 180 YTNNHQSSFL DQVVAKELHE AFKSLSGQES FVTDKNWPKK DDLYGFENYA ELDISKLLKV 240 DANSMVKEGE ASFSSLVEYS GNVNGLVTGA LNNERMSQNQ KRKRVDGCES LKTTSDFKVE 300 ISSLDEGDKA GLLVSPKRSR KPPRRYIEES LDYETKSHNR KCGIGRKSRD RNLHDRYQKY 360 NWQQEFQAEE LVYEDDSFNG GCIQVPFGLP MEKEHPKKNK LSPGFEDSKD NGLLDPKEKL 420 DIEPLLVESQ EDISEDECFV RSHTLKGNGR RKRHISWTPE EVVKLVEGVS QCGVGKWTEI 480 KRLLFSSSSH RTSVDLKDKW RNLLRASCTQ LQIKEKVEQN RKQTSLNYVP ESILCRVREL 540 AVIHPYPRDS RSKVSCTIPA VSSFPASTSS ALVPLSTAV

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MFSCKPYEVD SDMPIFPVSE DEPLGLEHFL VEPLRKEDWV GDLLDLDAFQ IEKCFNIEDI  60
SGTFDYDQIK LDAGREERSE WHGVVIPFTS NDAAYPKLTK GEGENLKMSS EKLQGINISV  120
REEYPTDTKC TDEACNLDYS TCKESCLGNG GLENQFQGSL KRDTGDAMVD LTSTNIPMLK  180
YTNNHQSSFL DQVVAKELHE AFKSLSGQES FVTDKNWPKK DDLYGFENYA ELDISKLLKV  240
DANSMVKEGE ASFSSLVEYS GNVNGLVTGA LNNERMSQNQ KRKRVDGCES LKTTSDFKVE  300
ISSLDEGDKA GLLVSPKRSR KPPRRYIEES LDYETKSHNR KCGIGRKSRD RNLHDRYQKY  360
NWQQEFQAEE LVYEDDSFNG GCIQVPFGLP MEKEHPKKNK LSPGFEDSKD NGLLDPKEKL  420
DIEPLLVESQ EDISEDECFV RSHTLKGNGR RKRHISWTPE EVVKLVEGVS QCGVGKWTEI  480
KRLLFSSSSH RTSVDLKDKW RNLLRASCTQ LQIKEKVEQN RKQTSLNYVP ESILCRVREL  540
AVIHPYPRDS RSKVSCTIPA VSSFPASTSS ALVPLSTAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-26	MYB_related family protein