PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65826.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 303aa    MW: 33856.9 Da    PI: 10.0821
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.41.2e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
       PON65826.1  5 KQKWTQEEEAALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGAPKQKWTQ EEEAALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK DKWRNMSVMA  60
NGWGSRDKAR VALRRIQHVP KQDESTNAIV AVQSDEETAE PMPPVGSSDT QHIQQTSVLK  120
RPIVRLDNLI MEALASLKEP GGSNKTAIAT YIEEQYRAPP DFKRLLSAKL KYLTSLGKLV  180
KVKRKYRIAP TPSFLEKRRT TSALLLEGRE REFENFDKDL PVLLTKEQVD LQLAQMRKMS  240
AKEAAAAAAQ AVREAEIAIA EAEQATREAE EAEADAEAAQ AFAEAAMKTL KARNAQKMQM  300
MRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-96MYB_related family protein