PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65563.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 718aa MW: 78568.3 Da PI: 7.4181

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.8	4.2e-16	340	399	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g PON65563.1 340 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 399 78*****************988886678446***********************98 PP
2	AP2	45.9	1.4e-14	442	493	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON65563.1 442 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 493 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MKSMNDHNSN NNNISNWLGF SLSPQMKMEL TSSSSTTTTA PSVSNSVPTS FYLSPSQLTS 60 SGLCYGIGTE NAAAFHSPLS VMPLKSDGSL CIMEALTRSQ PEVMVPSSSP KLEDFLGGAT 120 MGSHDQYGSQ DREAMALSLD SIYYNQNAES SETNRDHHHH HHPLDLLQQP FRQQDQPIPY 180 YSGIPCHGIY RTTPLGEDHQ ESKQIHIPDC TTTTTTTTNS QISQMPEVDH HSGMPCLKNW 240 VVTRQYSGQH SVDQAGNLVD VDTGVGCGSV GGISCGELQS LTLSMSPGSQ SSCITAPRQI 300 SPTGTECVAM VETKKRGSGK IGQKQTVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD 360 NSCKKEGQTR KGRQVYLGGY DMEEKAARAY DLAALKYWGP STHINFPLEN YQAELEEMKK 420 MTRQEYVAHL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA 480 AEAYDVAAIK FRGVNAVTNF DITKYDVDKI MASNTLLAGE LARRNKDIIE PIITDQTVDY 540 NSSQQINGCS EASQIESHNT NKTSTNGPDW KMGLYQSSPC LDQSLDQKNY RNASSFSMAL 600 QDLIGIESVN SSTNTTTTTH HQLAAPPGTH FSNPSSLVTS LSSSREASPD KSSGPTMAFA 660 RPPLASKFIS PTSGGVSSWF PSAAAAAGLR PAAAISMGHL PVFAPWNIDA EKSKSWGF

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MKSMNDHNSN NNNISNWLGF SLSPQMKMEL TSSSSTTTTA PSVSNSVPTS FYLSPSQLTS  60
SGLCYGIGTE NAAAFHSPLS VMPLKSDGSL CIMEALTRSQ PEVMVPSSSP KLEDFLGGAT  120
MGSHDQYGSQ DREAMALSLD SIYYNQNAES SETNRDHHHH HHPLDLLQQP FRQQDQPIPY  180
YSGIPCHGIY RTTPLGEDHQ ESKQIHIPDC TTTTTTTTNS QISQMPEVDH HSGMPCLKNW  240
VVTRQYSGQH SVDQAGNLVD VDTGVGCGSV GGISCGELQS LTLSMSPGSQ SSCITAPRQI  300
SPTGTECVAM VETKKRGSGK IGQKQTVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD  360
NSCKKEGQTR KGRQVYLGGY DMEEKAARAY DLAALKYWGP STHINFPLEN YQAELEEMKK  420
MTRQEYVAHL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA  480
AEAYDVAAIK FRGVNAVTNF DITKYDVDKI MASNTLLAGE LARRNKDIIE PIITDQTVDY  540
NSSQQINGCS EASQIESHNT NKTSTNGPDW KMGLYQSSPC LDQSLDQKNY RNASSFSMAL  600
QDLIGIESVN SSTNTTTTTH HQLAAPPGTH FSNPSSLVTS LSSSREASPD KSSGPTMAFA  660
RPPLASKFIS PTSGGVSSWF PSAAAAAGLR PAAAISMGHL PVFAPWNIDA EKSKSWGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-144	AP2 family protein