PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65559.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GRF

Protein Properties

Length: 614aa MW: 66000 Da PI: 8.8697

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65559.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	248	292	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e PON65559.1 248 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 292 79****************************************985 PP
2	QLQ	60.5	4.8e-21	178	214	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT +Q+++L++Q+l+yKy+ an+P+P++Ll +i+k PON65559.1 178 GPFTQSQWMELEHQALIYKYITANVPIPSNLLIPIRK 214 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MDIGVVMGLD NYGAGAVSDS ATGFGSISSS PDPEAKQRPY GSGLFPVKQE RSAAASGIIS 60 SSSSSTGLEE YLTSSKVAKT SIDDFSYCKL GMVQRNNVSS VLRSNCGQQQ QQMLSFSSPK 120 SETLMVDNKA ASHNSNAATL FSCNFPNALL SAYTRNTGYN SGSLNGGNMH GTIAGIRGPF 180 TQSQWMELEH QALIYKYITA NVPIPSNLLI PIRKAIESAA FSHFPAGLLR PNTLGWGSFH 240 LGFSNNADPE PGRCRRTDGK KWRCSRDAVA DQKYCERHMN RGRHRSRKPV EGQTGATAAT 300 TTTTTTTTSK LMPMASSASS VAMPGAGGSS NSLAISNHHH QIQSLETGAS NTSSATHLNR 360 MPQQNTSGLS LLSKETSFLT GSSREFGLVP TDSLLNPSQK NTSLLNCRSF GSSRDLTDRS 420 ETTEPNQQQQ QSLRHFIEDW PKSQPNRSAL SWPEIDVQSD RTQLSISIPI SSTDHFIPST 480 SSPDQKTSRL SPLRLSRELD RVPMSLGVGT GEQMRSRPQA NWIPIAWENS LGGPLGEVLH 540 HTNNSTNNNG SVECKNNNYS SSSSSMLNLM TEGWDSSPPM GSSPTGVLQK TSFGSFSNSS 600 AGSSPRAENN KSLD

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MDIGVVMGLD NYGAGAVSDS ATGFGSISSS PDPEAKQRPY GSGLFPVKQE RSAAASGIIS  60
SSSSSTGLEE YLTSSKVAKT SIDDFSYCKL GMVQRNNVSS VLRSNCGQQQ QQMLSFSSPK  120
SETLMVDNKA ASHNSNAATL FSCNFPNALL SAYTRNTGYN SGSLNGGNMH GTIAGIRGPF  180
TQSQWMELEH QALIYKYITA NVPIPSNLLI PIRKAIESAA FSHFPAGLLR PNTLGWGSFH  240
LGFSNNADPE PGRCRRTDGK KWRCSRDAVA DQKYCERHMN RGRHRSRKPV EGQTGATAAT  300
TTTTTTTTSK LMPMASSASS VAMPGAGGSS NSLAISNHHH QIQSLETGAS NTSSATHLNR  360
MPQQNTSGLS LLSKETSFLT GSSREFGLVP TDSLLNPSQK NTSLLNCRSF GSSRDLTDRS  420
ETTEPNQQQQ QSLRHFIEDW PKSQPNRSAL SWPEIDVQSD RTQLSISIPI SSTDHFIPST  480
SSPDQKTSRL SPLRLSRELD RVPMSLGVGT GEQMRSRPQA NWIPIAWENS LGGPLGEVLH  540
HTNNSTNNNG SVECKNNNYS SSSSSMLNLM TEGWDSSPPM GSSPTGVLQK TSFGSFSNSS  600
AGSSPRAENN KSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-80	GRF family protein