PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON65403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 463aa MW: 50991 Da PI: 4.589 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 86.6 | 1.9e-27 | 142 | 207 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg PON65403.1 142 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 463 aa Download sequence |
MSGSRAPNPS AQPSEQITHP LKPSQLPFSS MKPPFSVPGE YHRFGPDPRQ LTDHEAEAII 60 VKPPLKRKGD TADYEAESSD RVAGPKIVEV VNSSLQTPVS IKAGKTTKIT RLTKCSKARP 120 QTPVSIVGSP SGPNLTPAGP CRYDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGDADENY ASLQAEVENL SIEEHRVDEQ 240 IREMQERLRD LSEDENNQKW LFVTEDDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAVD 300 YPQRRYRVVL RSTMGPIDVY LVSQFEEKFE EINGVQVPAN FPSSSGVNEN PATTIGTENR 360 GKDIEVQGQH DQGISVDPNA PQDSVGGIMK IVPSDVDSDA DYWLLTDAAD VSITDMWRTE 420 PAVEWSDFGL HEDYATVNVS TPRPESPVSN PTEVPSIANP TGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-154 | E2F/DP family protein |