PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65313.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 370aa MW: 42998.7 Da PI: 8.5908

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.9	9.4e-07	64	85	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H PON65313.1 64 TCEECGVTFKKPAYLKQHMQSH 85 6*******************99 PP
2	zf-C2H2	17.9	8.4e-06	91	115	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC s++rk++L+rH+ H PON65313.1 91 YVCSvdDCRSSYRRKDHLTRHLLGH 115 99*******************9877 PP
3	zf-C2H2	14.7	9.2e-05	120	145	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ Fs + n+krH + H PON65313.1 120 FKCPteNCKREFSIQGNMKRHVKEqH 145 89********************9988 PP
4	zf-C2H2	16.7	2e-05	160	184	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F+ s L++H +H PON65313.1 160 YVCQeaSCGKAFRFASKLRKHEDSH 184 99*******************9888 PP
5	zf-C2H2	19.3	3.1e-06	251	275	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC C++sFs+ksnL +H + H PON65313.1 251 KCMykGCDRSFSTKSNLSQHVKAaH 275 577779**************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MDEAGGEERP IFRDIRRYFC QYCGICRSKK FLITSHILTH HKEELDEARA EEDNATEGVK 60 GSNTCEECGV TFKKPAYLKQ HMQSHSTERP YVCSVDDCRS SYRRKDHLTR HLLGHKGKLF 120 KCPTENCKRE FSIQGNMKRH VKEQHNGDHP STSTESEKQY VCQEASCGKA FRFASKLRKH 180 EDSHVKLESV EAVCAEPGCM KIFTNEQYLK EHIHSCHQHI TCEICGTKQL KKNLKRHLRT 240 HEEKGPFESI KCMYKGCDRS FSTKSNLSQH VKAAHLKQKP FVCSFSGCGM RFSYKHVRDN 300 HEKTGCHVYT HGDFEEADEQ FRSRPRGGRK RKYPTVEMLV RKRVSPPNQL DGPFGCFSNF 360 LWQDEEQIEP

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MDEAGGEERP IFRDIRRYFC QYCGICRSKK FLITSHILTH HKEELDEARA EEDNATEGVK  60
GSNTCEECGV TFKKPAYLKQ HMQSHSTERP YVCSVDDCRS SYRRKDHLTR HLLGHKGKLF  120
KCPTENCKRE FSIQGNMKRH VKEQHNGDHP STSTESEKQY VCQEASCGKA FRFASKLRKH  180
EDSHVKLESV EAVCAEPGCM KIFTNEQYLK EHIHSCHQHI TCEICGTKQL KKNLKRHLRT  240
HEEKGPFESI KCMYKGCDRS FSTKSNLSQH VKAAHLKQKP FVCSFSGCGM RFSYKHVRDN  300
HEKTGCHVYT HGDFEEADEQ FRSRPRGGRK RKYPTVEMLV RKRVSPPNQL DGPFGCFSNF  360
LWQDEEQIEP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	332	RPRGGRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-150	C2H2 family protein