PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65136.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 1242aa MW: 139167 Da PI: 5.6349

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.5e-09	1139	1180	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW+++E el++ a +q G + ++ I + ++ +Rt++q+k+++ k PON65136.1 1139 RWSKQETELFYGALRQIGAD-FTIIQQLFP-NRTREQVKLKFKK 1180 9*****************.*****.********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1242 aa Download sequence
MSGPLDRFAR PCFEGFSGSD ERRERKSDFE NSEDERRTRI GSLKKKALNA STKFKHSLKK 60 KSSRRKSDGR VSSVSIEDVR DAEELQAVDA FRQALIREEL LPEKHDDYHM MLRFLKARKF 120 DIEKAKHMWA DMLQWRKDFG ADTIREDFDF KEKNEVLKYY PHGHHGVDKE GRPVYIERLG 180 KVEPNKLMQV TSMERYIKYH VKEFEETFAT KFPACTIAAK RHIDSSTTIL DVQGVGLKNF 240 SKSARDLTLN QMFIINAGAG FRLVWASVKG FLDPKTSSKI HVLGNKYQSK LLEIIDASEL 300 PEFLGGSCTC ADHGGCLQSD KGPWKNPEIL KMVHNGEARR ARQIVKVINS EGKVTYIKPH 360 YPMLHHCFGC AFHQVKGSDT STGESGSEAE DIASPKAIKS YSHLRLTPVR EEAKAVGKAS 420 YAVTFSGYDE YVPMVDKAVD AGWKKQDCLQ RSQSFKVPED TKTSEKHVSE VVGLEEDLTS 480 ADGFHQEGGI KITSGVQKDD DKHLGSRKPE SKADFGGLGV DSFVHSTTEP TSSNADGSSE 540 HKNFVPASST LPDAIKERLV ALPTTGLDVE ATFQLGNVGK SAAQVDSMQF DVDPLDDMLS 600 ETSNTPAGHK FQPKMKPQPR KGATRAVASA LPNLMERPVT LCPVVQDSLQ SIQSIDNGNN 660 TLTDFVESSL AMSEIVGVKQ QPKDDDYPYS NVALFNNTRN LEMGSPSESH SIDALHSEDV 720 VPHGIGDLQS SFGKSLGENA DIYSELECLD DFITQTTSAT ATEASQLQSK VHMDVQEDDK 780 FLTSYGVNND LGGSVSNSRI ETQSVENVTA PEHHSFDGAP SQTCSDYHST QDPVTSCETA 840 VSDKQEEVHI NDGRSETEVD EALFDFETCE ATVASEATLS DCTVIADMHS EDDPGMGADV 900 GGKSRMGETS SEPHCLRRSK RSSTAIQEIE GVKSSRQLRK RLRQLVDESV DEDQDINGSF 960 CDPPGTSNRD EEEDSDEEYR VDNTSRKKKA ARKVNELAPG NEKPVRKRKS AKEASDELTN 1020 KPPRKFSHST RRRKRTVDKA LLDMPEDEID CQKLPIKDLI LLAEHRERMA VNLPSLIFLC 1080 NSSNSVENSF RENTSYNEET FVSEQDQHYD DDDQATYRAL PSTPFINYQS FMDKTPSTRW 1140 SKQETELFYG ALRQIGADFT IIQQLFPNRT REQVKLKFKK EERQHPLRIT EALNNRSKGE 1200 IPCLLHFSFY YPPSLPHLAL ESDKFPLVYW FQGWLLELGS QL

Sequence ? help Back to Top

Protein Sequence Length: 1242 aa Download sequence

MSGPLDRFAR PCFEGFSGSD ERRERKSDFE NSEDERRTRI GSLKKKALNA STKFKHSLKK  60
KSSRRKSDGR VSSVSIEDVR DAEELQAVDA FRQALIREEL LPEKHDDYHM MLRFLKARKF  120
DIEKAKHMWA DMLQWRKDFG ADTIREDFDF KEKNEVLKYY PHGHHGVDKE GRPVYIERLG  180
KVEPNKLMQV TSMERYIKYH VKEFEETFAT KFPACTIAAK RHIDSSTTIL DVQGVGLKNF  240
SKSARDLTLN QMFIINAGAG FRLVWASVKG FLDPKTSSKI HVLGNKYQSK LLEIIDASEL  300
PEFLGGSCTC ADHGGCLQSD KGPWKNPEIL KMVHNGEARR ARQIVKVINS EGKVTYIKPH  360
YPMLHHCFGC AFHQVKGSDT STGESGSEAE DIASPKAIKS YSHLRLTPVR EEAKAVGKAS  420
YAVTFSGYDE YVPMVDKAVD AGWKKQDCLQ RSQSFKVPED TKTSEKHVSE VVGLEEDLTS  480
ADGFHQEGGI KITSGVQKDD DKHLGSRKPE SKADFGGLGV DSFVHSTTEP TSSNADGSSE  540
HKNFVPASST LPDAIKERLV ALPTTGLDVE ATFQLGNVGK SAAQVDSMQF DVDPLDDMLS  600
ETSNTPAGHK FQPKMKPQPR KGATRAVASA LPNLMERPVT LCPVVQDSLQ SIQSIDNGNN  660
TLTDFVESSL AMSEIVGVKQ QPKDDDYPYS NVALFNNTRN LEMGSPSESH SIDALHSEDV  720
VPHGIGDLQS SFGKSLGENA DIYSELECLD DFITQTTSAT ATEASQLQSK VHMDVQEDDK  780
FLTSYGVNND LGGSVSNSRI ETQSVENVTA PEHHSFDGAP SQTCSDYHST QDPVTSCETA  840
VSDKQEEVHI NDGRSETEVD EALFDFETCE ATVASEATLS DCTVIADMHS EDDPGMGADV  900
GGKSRMGETS SEPHCLRRSK RSSTAIQEIE GVKSSRQLRK RLRQLVDESV DEDQDINGSF  960
CDPPGTSNRD EEEDSDEEYR VDNTSRKKKA ARKVNELAPG NEKPVRKRKS AKEASDELTN  1020
KPPRKFSHST RRRKRTVDKA LLDMPEDEID CQKLPIKDLI LLAEHRERMA VNLPSLIFLC  1080
NSSNSVENSF RENTSYNEET FVSEQDQHYD DDDQATYRAL PSTPFINYQS FMDKTPSTRW  1140
SKQETELFYG ALRQIGADFT IIQQLFPNRT REQVKLKFKK EERQHPLRIT EALNNRSKGE  1200
IPCLLHFSFY YPPSLPHLAL ESDKFPLVYW FQGWLLELGS QL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	938	944	LRKRLRQ
2	986	1009	RKKKAARKVNELAPGNEKPVRKRK
3	987	1010	RKKKAARKVNELAPGNEKPVRKRK
4	1003	1009	KPVRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	6e-36	MYB_related family protein