PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64771.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 388aa MW: 44777.2 Da PI: 6.8913

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89	5.3e-28	76	158	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem+ ++++k++k+lWe++s kmrergf rsp++C++kw+nl k++kk+k+++k+ s++s +++y++++e PON64771.1 76 WVQDETRSLIALRREMDGLFNTSKSNKHLWEQISVKMRERGFDRSPTMCTDKWRNLLKEFKKVKHQDKG--SGASAKMSYYKEIE 158 ******************************************************************8..789999***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MYLSEKPRPI DFYKEEGTPR DMMMEVVVSN GELPQPHNHH QHKQQQQQAH QHQMLLGESS 60 GEDHEVKAPK KRAETWVQDE TRSLIALRRE MDGLFNTSKS NKHLWEQISV KMRERGFDRS 120 PTMCTDKWRN LLKEFKKVKH QDKGSGASAK MSYYKEIEEI LRDRSKNAQY KSPTPPPKVE 180 SYMQFSDKGI EETSISFGPG EACGRQALNL ERRLDHDGHP LAITTAEAVA ASGVPPWNWR 240 ETPGNGGDSQ SYGGRVISVK WGDYTRRIGI DGTAEAIKEA IKSAFRLRTK RAFWLEDEDQ 300 IIRSLDRNMP LGNYTLHVDE GLVIKLCVYD ESDHIPAVHT EEKIFYSEDD YRDFLTRRGW 360 ACLREYDGFR NIDNMDDLRP NALYRGGT

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MYLSEKPRPI DFYKEEGTPR DMMMEVVVSN GELPQPHNHH QHKQQQQQAH QHQMLLGESS  60
GEDHEVKAPK KRAETWVQDE TRSLIALRRE MDGLFNTSKS NKHLWEQISV KMRERGFDRS  120
PTMCTDKWRN LLKEFKKVKH QDKGSGASAK MSYYKEIEEI LRDRSKNAQY KSPTPPPKVE  180
SYMQFSDKGI EETSISFGPG EACGRQALNL ERRLDHDGHP LAITTAEAVA ASGVPPWNWR  240
ETPGNGGDSQ SYGGRVISVK WGDYTRRIGI DGTAEAIKEA IKSAFRLRTK RAFWLEDEDQ  300
IIRSLDRNMP LGNYTLHVDE GLVIKLCVYD ESDHIPAVHT EEKIFYSEDD YRDFLTRRGW  360
ACLREYDGFR NIDNMDDLRP NALYRGGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein