PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64623.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GATA

Protein Properties

Length: 535aa MW: 59113.9 Da PI: 7.0903

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50.9	2.2e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+t+TplWR+gp ++ LCnaCG ++r kg+ PON64623.1 7 CHHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MGKQGPCHHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDFEDL 60 RISKVKSISS NKNKELKLLK RKHNYDNVVV GGFATDYNQG FRKVIDEDAS NRSSSGSAIS 120 NSESCAQFGG GDASDLTGPA QSNVWDTSVP SRKRTCVNRP KQSSVEKLTK DLYSILQEQQ 180 SSYFSGSSEE DLLFESGTPM VSVEIGHGSV LIRHPTAIAR EEESEASSLS VDNKHSHSNE 240 AYSHSATHYD SKGVTFSGPG REKINFAGHG MQQEQFKREK SHQEVFQILG SHNSPLHHID 300 LIDALDSEEF MRHLTNEEQQ QLLKFLPSVD VVKLPDSLKS LFDSPQFREN ITSFQQLLAE 360 GVFDISFSGA KPEDCKTLKR LALSNLSKSK WVEHYHLLKN PKSSSRVSVI SASNVTASSN 420 RRPQDSQNKK FPEVKIVMKS PKRMIVKGSY DKKEVIDNDG SCFSPRSLFA LPPDGSSFLL 480 DSINFVEESS DQVLLLDVPS NGSFAQAELL HPALSFGSQE ASTSSSSIYP HLVHP

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MGKQGPCHHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDFEDL  60
RISKVKSISS NKNKELKLLK RKHNYDNVVV GGFATDYNQG FRKVIDEDAS NRSSSGSAIS  120
NSESCAQFGG GDASDLTGPA QSNVWDTSVP SRKRTCVNRP KQSSVEKLTK DLYSILQEQQ  180
SSYFSGSSEE DLLFESGTPM VSVEIGHGSV LIRHPTAIAR EEESEASSLS VDNKHSHSNE  240
AYSHSATHYD SKGVTFSGPG REKINFAGHG MQQEQFKREK SHQEVFQILG SHNSPLHHID  300
LIDALDSEEF MRHLTNEEQQ QLLKFLPSVD VVKLPDSLKS LFDSPQFREN ITSFQQLLAE  360
GVFDISFSGA KPEDCKTLKR LALSNLSKSK WVEHYHLLKN PKSSSRVSVI SASNVTASSN  420
RRPQDSQNKK FPEVKIVMKS PKRMIVKGSY DKKEVIDNDG SCFSPRSLFA LPPDGSSFLL  480
DSINFVEESS DQVLLLDVPS NGSFAQAELL HPALSFGSQE ASTSSSSIYP HLVHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-142	GATA family protein