PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64128.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 365aa MW: 40439.6 Da PI: 7.4035

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	8.1e-16	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l++ +++ G g+W+t +++ g+ R++k+c++rw +yl PON64128.1 37 RGPWTAEEDEVLARFIRKEGEGRWRTLPKRAGLMRCGKSCRLRWMNYL 84 89********************************************97 PP
2	Myb_DNA-binding	46.5	8.5e-15	95	135	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l PON64128.1 95 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 135 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MRKQPPSSSS SSKTSNISTA TGGSKTTPCC SKVGIKRGPW TAEEDEVLAR FIRKEGEGRW 60 RTLPKRAGLM RCGKSCRLRW MNYLRPSVKR GHIAPDEEDL ILRLHRLLGN RWSLIAGRIP 120 GRTDNEIKNY WNTHLSKKLI SQGIDPRTHK PLNPVDDHHK EITNKSFPSS SSKTNPQRLS 180 LNPSPSPNNT YQTPLSPVPE EGKEEEEAAP SEAAATQTNN KEHGYFDFGQ YNQSKGKVGY 240 NFHGYENFTG YNSVGYGTGL RSSSTATTTN YVTGNEEDHH HAEDINYCSD DMFSSFLNSL 300 INEDAFSGPQ HELLPANGIN PPFSTTITDH DPAVLSTSGW ESASMSSAAL KQNENPTRVD 360 DGVLD

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MRKQPPSSSS SSKTSNISTA TGGSKTTPCC SKVGIKRGPW TAEEDEVLAR FIRKEGEGRW  60
RTLPKRAGLM RCGKSCRLRW MNYLRPSVKR GHIAPDEEDL ILRLHRLLGN RWSLIAGRIP  120
GRTDNEIKNY WNTHLSKKLI SQGIDPRTHK PLNPVDDHHK EITNKSFPSS SSKTNPQRLS  180
LNPSPSPNNT YQTPLSPVPE EGKEEEEAAP SEAAATQTNN KEHGYFDFGQ YNQSKGKVGY  240
NFHGYENFTG YNSVGYGTGL RSSSTATTTN YVTGNEEDHH HAEDINYCSD DMFSSFLNSL  300
INEDAFSGPQ HELLPANGIN PPFSTTITDH DPAVLSTSGW ESASMSSAAL KQNENPTRVD  360
DGVLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	5e-83	MYB family protein