PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64000.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

FAR1

Protein Properties

Length: 285aa MW: 32599.2 Da PI: 8.4657

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8.5e-27	120	208	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+r+g+i r++ C+keg+ + + k r++r++tr gCka+++vk +k+gkw++tk+++eHnH+l+ PON64000.1 120 FYDEYARQVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 208 9************************************99999998**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGKFFFLYCM WCQTSGLQSH QPLYPDPPYQ TLKHRAPTLT LLSGVFEPST STTPKSSTEI 60 PVPTHKTTTY LALLESMDLD EGAGAVESSA GQELVTYEGD AILEPFEGME FDSEDAAKIF 120 YDEYARQVGF VMRVMSCRRS ERDGRILARR LGCNKEGHCV SIRGKFGPVR KPRPSTREGC 180 KAMIHVKYDK SGKWVITKFV KEHNHPLVFS PREARQTMDE KDKKIQELTA ELRNKKRLCT 240 TYQEQLSAFI RIVEEHSNEL SKKVQNVVSN LKKFEPIDQD LSQHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-110	FAR1 family protein