PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON63572.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 550aa    MW: 61724 Da    PI: 6.8271
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON63572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS444.38.4e-1361815502374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++L+ cA+av ++dl  aq+l+ +l+ ++s +g+p+qRl ay++e+L arla+s+s+++kal+++e +   sse l+++++++e++P++kf+++ aN 
  PON63572.1 181 KQVLICCAKAVLDNDLLVAQWLMDELRRMVSVSGEPIQRLGAYMLEGLVARLASSGSNICKALKCKEPA---SSELLSYMHILYELCPYFKFGYMSANG 276
                 689*****************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 aI ea++ e+rvHiiDf++ qG+QW++L+qa+a+Rp+gpp++RiTg++++ s   +   l+ +g++L+k+Ae+++vpfefn+ va + ++++le+L+++
  PON63572.1 277 AIAEAMKDENRVHIIDFQVAQGGQWITLIQAFAARPGGPPHIRITGIDDSMSAyaRGGGLSIVGKKLSKLAETFKVPFEFNA-VAISGSEVQLEDLAIR 374
                 *************************************************888789999************************.6889************ PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 pgEalaVn+++ lh+  desvs++++rd++L+lvkslsP+vv++veqe+++n++ F  rf+e+l+yy+a+f+s++++l+re++eri+vE+++l+re+vn
  PON63572.1 375 PGEALAVNFAFVLHHKADESVSTQNHRDRLLRLVKSLSPTVVTLVEQESNTNTAAFYPRFVETLNYYTAMFESIDVTLSREHKERINVEQHCLAREVVN 473
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++aceg+er+erhe l+kW+ r+++aGF+p+pls+ +++++k+ll+++ ++ yr+ee++g+l+lgW++r Lv+ SaW+
  PON63572.1 474 IIACEGSERVERHELLGKWKLRFKMAGFTPYPLSSLVNATIKTLLENYCKK-YRLEERDGALYLGWMNRYLVTSSAWQ 550
                 *************************************************66.*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MQRSQKRRSS SMSNRLYYQP PIQDVESYCL PQFRSLDREL CYSDSGRSHG AHFSAKNSFQ  60
LYSTLESSSG NGSVNMYKSP STVSFSPSGS PMSQQDSHSY LPDQHNSPEN TYGSPISGSC  120
VTDDMSDWKY KLKELESAML GPDLSILDNY EIAYQKGTRN SSNETESWGQ IMESISIRDV  180
KQVLICCAKA VLDNDLLVAQ WLMDELRRMV SVSGEPIQRL GAYMLEGLVA RLASSGSNIC  240
KALKCKEPAS SELLSYMHIL YELCPYFKFG YMSANGAIAE AMKDENRVHI IDFQVAQGGQ  300
WITLIQAFAA RPGGPPHIRI TGIDDSMSAY ARGGGLSIVG KKLSKLAETF KVPFEFNAVA  360
ISGSEVQLED LAIRPGEALA VNFAFVLHHK ADESVSTQNH RDRLLRLVKS LSPTVVTLVE  420
QESNTNTAAF YPRFVETLNY YTAMFESIDV TLSREHKERI NVEQHCLARE VVNIIACEGS  480
ERVERHELLG KWKLRFKMAG FTPYPLSSLV NATIKTLLEN YCKKYRLEER DGALYLGWMN  540
RYLVTSSAWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein