PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON62830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | NF-YC | ||||||||
Protein Properties | Length: 123aa MW: 13502.5 Da PI: 7.5783 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 96.8 | 1.7e-30 | 18 | 101 | 18 | 98 |
NF-YC 18 nhelPlarikkilk...adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 h+lPlarikki+k + ++vkmis +aPv+++kacelfi elt +sw + + krr l+k d+a+av td+fdflv v PON62830.1 18 AHSLPLARIKKIMKrcgSGDEVKMISGDAPVVFAKACELFIKELTQKSWTLTLQGKRRILHKDDVASAVVATDVFDFLVGLVSD 101 599***********555579**********************************************************998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MRQAGTYSGI RFGGGNGAHS LPLARIKKIM KRCGSGDEVK MISGDAPVVF AKACELFIKE 60 LTQKSWTLTL QGKRRILHKD DVASAVVATD VFDFLVGLVS DGDDYDHHAQ NLVPKERETV 120 LEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 1e-22 | NF-YC family protein |