PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62716.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 547aa MW: 59546.7 Da PI: 6.5608

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	123	145	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg+++++ ++ +H ++ PON62716.1 123 FECPICGQVYRSEDDVSVHVDSC 145 89*****************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MDDVKDKVKG FMKKVNNPFS SSSSSGRFKG QGRVLGSSSS SSFGPSNPIL PRPSYTPQSN 60 PPSVSNSNSK PSPQKTRLSS DPKPELPSSN SNQDRKPANG FDPFESLVTS GKRCRNGFSP 120 DVFECPICGQ VYRSEDDVSV HVDSCVNGSE NGVTSGLPGD GGDSSRSELE ACVGGFLSGK 180 PESGSIEVVL KLLKNMVREP ENAKFRKIRM GNPKIREAIG DVAGGVELLE SVGFELREED 240 GEMWAAMEVP SEERIGLMKY AVQLLELQQV QEPQKSTSSM AVASVEVVGN VEPRKIDRQG 300 NIRVFAILKE SLHLFICCGC PIKGGSGCGN SDTVALKIRG NSNGDYGGNM VASSYYFTCG 360 GKIFEAVMTV TKVFFSVPEN IAAKIELPDS FYSLSLEELK REAEIRKKKM ADSQLLVPRS 420 LKEKQAKAAR RRYTRTVIRI QFPDCVVLQG FFSPLEPTSS LYEFVSSALK EPSLEFRLLN 480 PVNVKRRVIP SLTPGEKQTT LEEEQLVPSA LIKFIPSETD SVVFTGLLNE LLEISEPLVA 540 ESAVSPI

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MDDVKDKVKG FMKKVNNPFS SSSSSGRFKG QGRVLGSSSS SSFGPSNPIL PRPSYTPQSN  60
PPSVSNSNSK PSPQKTRLSS DPKPELPSSN SNQDRKPANG FDPFESLVTS GKRCRNGFSP  120
DVFECPICGQ VYRSEDDVSV HVDSCVNGSE NGVTSGLPGD GGDSSRSELE ACVGGFLSGK  180
PESGSIEVVL KLLKNMVREP ENAKFRKIRM GNPKIREAIG DVAGGVELLE SVGFELREED  240
GEMWAAMEVP SEERIGLMKY AVQLLELQQV QEPQKSTSSM AVASVEVVGN VEPRKIDRQG  300
NIRVFAILKE SLHLFICCGC PIKGGSGCGN SDTVALKIRG NSNGDYGGNM VASSYYFTCG  360
GKIFEAVMTV TKVFFSVPEN IAAKIELPDS FYSLSLEELK REAEIRKKKM ADSQLLVPRS  420
LKEKQAKAAR RRYTRTVIRI QFPDCVVLQG FFSPLEPTSS LYEFVSSALK EPSLEFRLLN  480
PVNVKRRVIP SLTPGEKQTT LEEEQLVPSA LIKFIPSETD SVVFTGLLNE LLEISEPLVA  540
ESAVSPI