PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON62617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26762.8 Da PI: 5.0139 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.7e-17 | 86 | 136 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f +ae Aa a+++a+ +l+g PON62617.1 86 SYRGVRARP-WGKYAAEIRDSTRNG--IRVWLGTFESAEAAALAYDQAAFALRG 136 69*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MEYSSFFDQF SSSESSFGNS LDSLSWDELL LFDDVVRNTN DIQSLPELTS QYDDVVKEEL 60 MEVTSNPKLA LQPDQSPNKK EITKKSYRGV RARPWGKYAA EIRDSTRNGI RVWLGTFESA 120 EAAALAYDQA AFALRGSLAV LNFPVDVVRQ SLQEMKCCRF DQDQEAGGHC SPVVALKKRH 180 SMRRKKAGNN RKNKEAPPQN NVVVLEDLGA EYLEQLLSLS SSETTTITAN SNYISGQSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-36 | ERF family protein |