PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON62615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 169aa MW: 19232.4 Da PI: 9.7917 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 7e-18 | 22 | 73 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+G+r+++ +g+++AeIrdp+ +r +lg+f taeeAa+a+++a+ +++g+ PON62615.1 22 RYRGIRRRP-WGKFAAEIRDPTRK--GARQWLGTFETAEEAARAYDRAAFAFRGH 73 69*******.**********8542..4*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MEGKRSQMRN DQQIKRRSSE VRYRGIRRRP WGKFAAEIRD PTRKGARQWL GTFETAEEAA 60 RAYDRAAFAF RGHSAILNFP NEHKSSFHNQ QEQDATFDYS NNTSTAAAAS LPASTFCATA 120 VGRRSVVSEG NRCGGVVEVI EFEYLDNKLL EDLLDSQELD THKKKLRMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-24 | ERF family protein |