PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62590.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 236aa    MW: 26002.9 Da    PI: 6.839
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.55.2e-3971071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp ++r+ a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+la++k
  PON62590.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVSDRPGAAITISYEAQARLKDPIYGCVSHIFALQQQVINLQAQLASIK 105
                 7*************************89********************************************************************999 PP

      DUF260  99 ee 100
                 e+
  PON62590.1 106 EQ 107
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD  60
RPGAAITISY EAQARLKDPI YGCVSHIFAL QQQVINLQAQ LASIKEQAAH SFGANGSASG  120
NPNEKYLKDV HNWFQSENSN NMVPQISPNM TIDASYTLPY FENKAPLASN SGGSSCENSI  180
FVEENNNELY NNGRFDEAFH FMSSLDSLQT VHRQVGFQDY YSDDLQSVPF SYARHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.11e-66LBD family protein