PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62583.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 220aa    MW: 24758.3 Da    PI: 10.011
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62583.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.7e-053961123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C+++F++   L  H+++H
  PON62583.1 39 YTCSFCKRHFKSAQALGGHMNVH 61
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MERPNLSIGK TIKAKWKCSS DFSTSEYYQC EISWGVKNYT CSFCKRHFKS AQALGGHMNV  60
HRRERARLRL LPPSLPAECS NPNPTLSSLS PSSPAPLSSA KFLPHYGYKP PHYSFPSASL  120
YNALSLSASP SAISTYKDQK SIFDFPPSNN VPLSPRVMRD KTSTTSTTTA DSMRPVRDLQ  180
QKDEYFKALK TEKLLRLDLK MGLLKGQKED VDLELRLGYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.11e-11C2H2 family protein