PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62322.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 273aa    MW: 30622.2 Da    PI: 9.7201
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.91.9e-1811109199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffkv +++++   +rl +p  fa +h  +k  s  + l+ + g+ W+v +++r ++++  + + kGWk F ++n+L+ gD+++F +++++e ++ v++f
  PON62322.1  11 FFKVVMQPSYVLGDRLKIPSYFAMKHLRDK--SGLVNLKVLGGKIWSVAFTFRVYGESlnVQFYKGWKVFSQENNLDIGDVCIFVMTKDREVSFEVTIF 107
                 889999999999999***********6664..448*****************999999889999*********************999988889****9 PP

                 -S CS
          B3  98 rk 99 
                 r+
  PON62322.1 108 RA 109
                 96 PP
2B347.72.8e-15189270186
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                 f+ vl p ++++++ l +p kfa+++ +k  +++ ++le +   +W+ k+i+  + +++ l +GW+ F+ +n+L +gD++ F+l+ 
  PON62322.1 189 FQVVLQPTHTHSNSYLPVPFKFAKKYINK--NQRNVILEVPGESVWSAKCII--GNQSVGLYTGWSAFAVENNLVAGDVCFFELVT 270
                 78899999******************544..3457***************55..55557799*********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MTRGFKSKNP FFKVVMQPSY VLGDRLKIPS YFAMKHLRDK SGLVNLKVLG GKIWSVAFTF  60
RVYGESLNVQ FYKGWKVFSQ ENNLDIGDVC IFVMTKDREV SFEVTIFRAK ENASSPTYKG  120
GGIQISPNSD DETRILVPPD FPMKQASGGI STPQTCPGQE GIQRQRPPTP YENPTALKRT  180
CVKSDNPIFQ VVLQPTHTHS NSYLPVPFKF AKKYINKNQR NVILEVPGES VWSAKCIIGN  240
QSVGLYTGWS AFAVENNLVA GDVCFFELVT ETK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-18B3 family protein