PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61960.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ERF
Protein Properties Length: 281aa    MW: 31404.1 Da    PI: 4.9949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.4e-2180129255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r+++ +g+W+AeIrdp     + +r++lg++ taeeAa+a+++a+k+++g
  PON61960.1  80 VYRGIRQRP-WGKWAAEIRDPQ----KgARVWLGTYNTAEEAARAYDEAAKRIRG 129
                 69*******.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MCGGAIISDF VAAKRGRKLT PKDLWSELDT ISDLLGIDHG YSSNATMVND KKGQKLKGRV  60
REEDGGNNDI KSTPRSRKNV YRGIRQRPWG KWAAEIRDPQ KGARVWLGTY NTAEEAARAY  120
DEAAKRIRGD KAKLNFTTTK QQQPSSASAP APTQPPPFKK QCVVPELTPP SYSQTTPALS  180
SYVTPYNYPM FDSNESEDNQ FYCCKSELEQ PSEMELKEQL SSLESLLGLE PAVQLSQLSG  240
SGELGEEEEE EETESVGLWM LDDVVTHHQQ QQVLQRGLLL Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11455KRGRKLTPKDLWSELDTISDLLGIDHGYSSNATMVNDKKGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-37ERF family protein