PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61928.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

CAMTA

Protein Properties

Length: 919aa MW: 103456 Da PI: 7.0409

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	162.2	9.4e-51	25	142	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++e ++rwl+++ei+a+L n++ ++++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LK+g+ e +++yYah+++ ptf rrcy PON61928.1 25 MEEaTARWLRPNEIHAMLCNYRYFTIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKIGNEERIHVYYAHGQDYPTFVRRCY 123 455589******************************************************************************************* PP CG-1 100 wlLeeelekivlvhylevk 118 wlL+++le+ivlvhy+e++ PON61928.1 124 WLLDKSLEHIVLVHYRETQ 142 **************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MEGELVGSEI HGFHTLRDLD VQSMMEEATA RWLRPNEIHA MLCNYRYFTI HVKPVNLPKS 60 GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKIG NEERIHVYYA HGQDYPTFVR 120 RCYWLLDKSL EHIVLVHYRE TQEVQGSPVT PVNSNSSSSS DPTAPWVLSD ELDSGTQDAF 180 YAGGKELLGS GETLTVRNHE QSLLDINTLE WDELLVTNDP TNSALGADKV SCFNQQNQGA 240 GNGFLSGGAS NMVAEHSSFD NLTNPTAGSG NAPGDLPNSV YVQTMEGQLN SDFQGRNSVG 300 VGTGDSLDIL VNKGLHSQDS FGRWINGILT ESPGPVTDPV LGTSILSPQD SFVSTATGHF 360 QSPAPEQIFI ITDVSPEWVY SNEKTKILVT GLFQEQYLHL AKSNLLCVCD DIGVSAEFIQ 420 VGVYRCWIPP HSPGSINLFL SSDGHKPISQ VVKLEYRPPM FSEPVTSSEE RYNWDEFRLQ 480 MRLAHLLFSS LKSLSILSDK VSPNALKEGK KFANKTSKLS NTWAVFIKSI ENETTLFPQA 540 KDNLFKLILR DRLKEWLLEK VIEGCKPTEF DVQGRGVIHL CAILGYTWAI HLFSLSGLSL 600 DFRDKHGWTA LHWAAYYGND KMVGVLLTLG AKPNLVTDPT SENPGGCTPG DLASMRGYDG 660 LAGYLSEKAL VEQFKDMSLA GNASGTLDTG ANDAVYPENL SEEQLFMKDT LAAYRIAADA 720 AARIQVAFWE HSYKIRTKAV EDSNPEDEAR SIIAAMKIQH AFRNFETRKK IAAAARIQYR 780 FRTWKIRKDF LNLRRHTIKI QAAFRGYQVR RQYRKILWSV GILEKAVLRW RLKRKGFRGL 840 QVNPVEAVAD QGRESDTEED FYKTSQKQAK ERVERSVVRV QAMFRSKKAQ EEYHQMKVAH 900 YQAKLEYEGL FDLDTDMNG

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MEGELVGSEI HGFHTLRDLD VQSMMEEATA RWLRPNEIHA MLCNYRYFTI HVKPVNLPKS  60
GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKIG NEERIHVYYA HGQDYPTFVR  120
RCYWLLDKSL EHIVLVHYRE TQEVQGSPVT PVNSNSSSSS DPTAPWVLSD ELDSGTQDAF  180
YAGGKELLGS GETLTVRNHE QSLLDINTLE WDELLVTNDP TNSALGADKV SCFNQQNQGA  240
GNGFLSGGAS NMVAEHSSFD NLTNPTAGSG NAPGDLPNSV YVQTMEGQLN SDFQGRNSVG  300
VGTGDSLDIL VNKGLHSQDS FGRWINGILT ESPGPVTDPV LGTSILSPQD SFVSTATGHF  360
QSPAPEQIFI ITDVSPEWVY SNEKTKILVT GLFQEQYLHL AKSNLLCVCD DIGVSAEFIQ  420
VGVYRCWIPP HSPGSINLFL SSDGHKPISQ VVKLEYRPPM FSEPVTSSEE RYNWDEFRLQ  480
MRLAHLLFSS LKSLSILSDK VSPNALKEGK KFANKTSKLS NTWAVFIKSI ENETTLFPQA  540
KDNLFKLILR DRLKEWLLEK VIEGCKPTEF DVQGRGVIHL CAILGYTWAI HLFSLSGLSL  600
DFRDKHGWTA LHWAAYYGND KMVGVLLTLG AKPNLVTDPT SENPGGCTPG DLASMRGYDG  660
LAGYLSEKAL VEQFKDMSLA GNASGTLDTG ANDAVYPENL SEEQLFMKDT LAAYRIAADA  720
AARIQVAFWE HSYKIRTKAV EDSNPEDEAR SIIAAMKIQH AFRNFETRKK IAAAARIQYR  780
FRTWKIRKDF LNLRRHTIKI QAAFRGYQVR RQYRKILWSV GILEKAVLRW RLKRKGFRGL  840
QVNPVEAVAD QGRESDTEED FYKTSQKQAK ERVERSVVRV QAMFRSKKAQ EEYHQMKVAH  900
YQAKLEYEGL FDLDTDMNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein