PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61766.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 242aa    MW: 27533.3 Da    PI: 8.3408
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-08126168346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       WT eE ++l d++kq+  + +  Ia +++  Rt +++k+r+++
       PON61766.1 126 TWTREETDQLFDLCKQFDLR-FIVIADRFPSSRTVEELKDRYYN 168
                      7*******************.*********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MDAKDILGLP KNALPVPQEK KSRPQKDSQR KPDGISREVY ALTGGVPPLM PSIDSKKRPP  60
ADEKITWQWL AFTSSARKDN LQLYHWVRVV NGVPPTGDYS FAKYNKSVDI VQYTDEEYDK  120
HLADPTWTRE ETDQLFDLCK QFDLRFIVIA DRFPSSRTVE ELKDRYYNGM SSFPLLDSYL  180
SSILRVYLRT YALDQMIQAA RLLAAIPPSA RETSLASAVN LLEGKYKGDA DVLMTAFSNR  240
TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47210.11e-101MYB_related family protein