PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON61168.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 506aa MW: 53848.4 Da PI: 8.6789

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON61168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.6	1.5e-15	334	379	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L ++++Y+k+Lq PON61168.1 334 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIDYLKQLQ 379 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MSQCVPSWDL DDSTSPHTAR LPPRFRSNST APDVPLLDYE VAELTWENGQ IAMHGLGPPR 60 VPNKALTSWA PEKPRAGGTL ESIVNQATRS SLPLPRKPPI FSHTIDAGGV GVGAAAGDEL 120 VPWFDGHGGS AAAVSNNTMT MDAQVPCSNN NNGAASSHHN DRASARAAAA RDSATVPGFG 180 TCRGGGLMRS YTQVASCSGA ATQEENNAGG NGMLVPGKRV SRLSGNGAAR EWSCRPDPSL 240 SETASATFGS HQVRMDSSER ETLGLGFAST SMGSRENGSS AKPSTKGTAA TAADDHDSVC 300 HSRPQRESGD EDDKKKGNGK SSVSTKRSRA AAIHNQSERK RRDKINQRMK TLQKLVPNSS 360 KTDKASMLDE VIDYLKQLQA QVQMMSRMNM PAMMLPVALQ QQLQMSMMNS MGMGMGMTMD 420 MNTIGRHNFA GISPVLHPTP FMPMTSWDGS GAADGRLGQP QLAALVPDPL SSFFTCQSQP 480 MTTEVYSRMA AMYQQLHQPP APSSKS

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MSQCVPSWDL DDSTSPHTAR LPPRFRSNST APDVPLLDYE VAELTWENGQ IAMHGLGPPR  60
VPNKALTSWA PEKPRAGGTL ESIVNQATRS SLPLPRKPPI FSHTIDAGGV GVGAAAGDEL  120
VPWFDGHGGS AAAVSNNTMT MDAQVPCSNN NNGAASSHHN DRASARAAAA RDSATVPGFG  180
TCRGGGLMRS YTQVASCSGA ATQEENNAGG NGMLVPGKRV SRLSGNGAAR EWSCRPDPSL  240
SETASATFGS HQVRMDSSER ETLGLGFAST SMGSRENGSS AKPSTKGTAA TAADDHDSVC  300
HSRPQRESGD EDDKKKGNGK SSVSTKRSRA AAIHNQSERK RRDKINQRMK TLQKLVPNSS  360
KTDKASMLDE VIDYLKQLQA QVQMMSRMNM PAMMLPVALQ QQLQMSMMNS MGMGMGMTMD  420
MNTIGRHNFA GISPVLHPTP FMPMTSWDGS GAADGRLGQP QLAALVPDPL SSFFTCQSQP  480
MTTEVYSRMA AMYQQLHQPP APSSKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	338	343	ERKRRD
2	339	344	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	7e-95	bHLH family protein