PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60928.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 361aa MW: 40279.3 Da PI: 8.629

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.2	1.8e-12	56	112	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g PON60928.1 56 SIYRGVTRHRWTGRYEAHLWDkNCWNDsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 112 57*****************99998888888888******************98 PP
2	AP2	49.6	9.6e-16	155	206	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + +k+ +lg++ t eeAa a++ a+ +++g PON60928.1 155 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTYATQEEAATAYDMAAIEYRG 206 89**99******988422...5***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MAKVSRKSQK NNAPTTNKGG SDDDNNNNNN NNKAKTKAIK RTRKSVPRDS PPRRSSIYRG 60 VTRHRWTGRY EAHLWDKNCW NDSQNKKGRQ GAYDDEEAAA HAYDLAALKY WGQDTILNFP 120 LSTYQEELKE MEGQSKEEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK 180 YLYLGTYATQ EEAATAYDMA AIEYRGINAV TNFDLSRYIK WLRPTNQNSP NNFQPNPNGD 240 LINSTPNENP QRSGLISSSV GNSVAVPPCN GGGGASPSSA LGLLLQSSKF KEMLERTSAA 300 DCPTTPSEVE PPRRSFPEDI QTYFDCQDSG SYTEGDDILF GDLGNTFSIN APIFHCEELD 360 A

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MAKVSRKSQK NNAPTTNKGG SDDDNNNNNN NNKAKTKAIK RTRKSVPRDS PPRRSSIYRG  60
VTRHRWTGRY EAHLWDKNCW NDSQNKKGRQ GAYDDEEAAA HAYDLAALKY WGQDTILNFP  120
LSTYQEELKE MEGQSKEEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK  180
YLYLGTYATQ EEAATAYDMA AIEYRGINAV TNFDLSRYIK WLRPTNQNSP NNFQPNPNGD  240
LINSTPNENP QRSGLISSSV GNSVAVPPCN GGGGASPSSA LGLLLQSSKF KEMLERTSAA  300
DCPTTPSEVE PPRRSFPEDI QTYFDCQDSG SYTEGDDILF GDLGNTFSIN APIFHCEELD  360
A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	6e-92	AP2 family protein