PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60464.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-X1

Protein Properties

Length: 1122aa MW: 120843 Da PI: 8.1053

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.7	4.5e-07	319	337	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+++CH GpC+ C+ PON60464.1 319 CGRHRCERICHVGPCDRCQ 337 ****************996 PP
2	zf-NF-X1	18.6	4.1e-06	536	554	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++lCH G CppC PON60464.1 536 CGQHSCESLCHSGHCPPCL 554 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1122 aa Download sequence
MSSNVRSERR DRPRSTAQPS RREWLPRGSA TVTVANPNPN PNPNPNPNPN PNPSPSPSSS 60 SNSNSNPAGN GGDSTNSSAA PQSWYRGNNS SRGQVSRLPN HRRERERGNE TQELGPLREG 120 SANKNGRVLK DSSLPQLVQE IQEKLMKGAV ECMICYDMVR RSAPVWSCSS CYSIFHLNCI 180 KKWARAPTSV DLSVDKNQGV NWRCPGCQSV QLTSSKEIRY VCFCGNRADP PSDLYLTPHS 240 CGEPCGKPLE RDVVGPGGSK EDLCPHVCVL QCHPGPCPPC KAFAPPRICP CGKKTITTRC 300 SDRKSVLTCG QCCDKVLGCG RHRCERICHV GPCDRCQVLV NASCFCKKTV EAVLCADMTV 360 KGEVRAEDGV FSCNSLCGKK LNCGNHFCGE ICHPGSCGEC GLLPSKTKTC HCGKTISEKE 420 RQSCLDPIPT CSQICQKLLP CGKHYCEEVC HAGHCAPCLV KVTQKCRCTS SSRNVECYKT 480 TSDEKFTCDK ACGRKKSCGR HRCSERCCPL SNLSNTFSGD WDQHFCSMSC GKKLRCGQHS 540 CESLCHSGHC PPCLETIFTD LTCACGRTSI PPPLPCGTPS PSCQLPCSVP QPCGHSSSHS 600 CHFGDCPPCS VPVAKECIGG HVVLRNIPCG SRDIRCNKLC GKTRQCGMHA CGRTCHPPPC 660 DGHTESEPGL RSSCGQTCGA PRRDCRHTCI APCHPSSVCP DIRCDFPMSI TCLCGRITAT 720 VPCDAGGSNG SYNADTLYEA SVIQKLPVPL QPVEASMPGK KIPLGQRKLM CDDECAKLER 780 KRTLADAFDI APPNLDALHF GESSAVSELL GDLYRRDPKW VISVEERCKY LVLGKSRGTT 840 SGLKVHVFCP MLKDKRDAVR VIAERWKLAV NAAGWEPKRF IVVHVTSKSK VPPRVLGVKG 900 TTTASAPQPP AFDPLVDMDP RLVVSFPDLP RDADISALVL RFGGECELVW LNDKNALAVF 960 HDPARAATAM RRLDHGSVYH GAVATAGASG SSSGTNAWGG AGIAKSNPWK KAVVQEDTWG 1020 GEEWSSGGSA NVQASAWKKE APLAASLNRW SILDRESALS SSTSAGIKDS SKEAAGGSVS 1080 SLESNASAQG PAGPYFGNVT ETETTEVVDD WEKAYDTMAD DK

Sequence ? help Back to Top

Protein Sequence Length: 1122 aa Download sequence

MSSNVRSERR DRPRSTAQPS RREWLPRGSA TVTVANPNPN PNPNPNPNPN PNPSPSPSSS  60
SNSNSNPAGN GGDSTNSSAA PQSWYRGNNS SRGQVSRLPN HRRERERGNE TQELGPLREG  120
SANKNGRVLK DSSLPQLVQE IQEKLMKGAV ECMICYDMVR RSAPVWSCSS CYSIFHLNCI  180
KKWARAPTSV DLSVDKNQGV NWRCPGCQSV QLTSSKEIRY VCFCGNRADP PSDLYLTPHS  240
CGEPCGKPLE RDVVGPGGSK EDLCPHVCVL QCHPGPCPPC KAFAPPRICP CGKKTITTRC  300
SDRKSVLTCG QCCDKVLGCG RHRCERICHV GPCDRCQVLV NASCFCKKTV EAVLCADMTV  360
KGEVRAEDGV FSCNSLCGKK LNCGNHFCGE ICHPGSCGEC GLLPSKTKTC HCGKTISEKE  420
RQSCLDPIPT CSQICQKLLP CGKHYCEEVC HAGHCAPCLV KVTQKCRCTS SSRNVECYKT  480
TSDEKFTCDK ACGRKKSCGR HRCSERCCPL SNLSNTFSGD WDQHFCSMSC GKKLRCGQHS  540
CESLCHSGHC PPCLETIFTD LTCACGRTSI PPPLPCGTPS PSCQLPCSVP QPCGHSSSHS  600
CHFGDCPPCS VPVAKECIGG HVVLRNIPCG SRDIRCNKLC GKTRQCGMHA CGRTCHPPPC  660
DGHTESEPGL RSSCGQTCGA PRRDCRHTCI APCHPSSVCP DIRCDFPMSI TCLCGRITAT  720
VPCDAGGSNG SYNADTLYEA SVIQKLPVPL QPVEASMPGK KIPLGQRKLM CDDECAKLER  780
KRTLADAFDI APPNLDALHF GESSAVSELL GDLYRRDPKW VISVEERCKY LVLGKSRGTT  840
SGLKVHVFCP MLKDKRDAVR VIAERWKLAV NAAGWEPKRF IVVHVTSKSK VPPRVLGVKG  900
TTTASAPQPP AFDPLVDMDP RLVVSFPDLP RDADISALVL RFGGECELVW LNDKNALAVF  960
HDPARAATAM RRLDHGSVYH GAVATAGASG SSSGTNAWGG AGIAKSNPWK KAVVQEDTWG  1020
GEEWSSGGSA NVQASAWKKE APLAASLNRW SILDRESALS SSTSAGIKDS SKEAAGGSVS  1080
SLESNASAQG PAGPYFGNVT ETETTEVVDD WEKAYDTMAD DK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein