PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON60344.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 405aa MW: 45903.8 Da PI: 9.688 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.8 | 1.1e-07 | 309 | 356 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd++ ++G g+W+ I r + Rt+ +++++w+++l PON60344.1 309 WTISEVNKLVDGISEYGVGRWTDIKRLLFtssAYRTPIDLRDKWRNLL 356 ********************************99************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
METCFFHVFK SGLDSKTAQD GEDELELGVL DGLLDEVEEI EDLHAADGLA SPSEDFLLDI 60 GFAAKACGLG FGPCGVSLPR NVSCESQSPG LSGSSNSAVG ISESSSVTIQ ENDSLNKPAT 120 YQLPVFRHKR RHKMPVQSID LHNHNILDDD DEDDPLLSSM LLNRNGKNLG EGSKIGASRR 180 EKRLRKPTQR YIEEFSDKKS KYFKGQEKFS AVAAAGMKDK RLKVRSSDEE RSMRPGMLSS 240 VPEELSCETK TLVVSEFRAR RGRPKKQAST SVPKLKEEVF TSDSDDDDDH RVKRKRSDKH 300 DRRKHQRMWT ISEVNKLVDG ISEYGVGRWT DIKRLLFTSS AYRTPIDLRD KWRNLLRASS 360 LQKLKKREAE EKQSHALRPL PKSLIRRVRE LAKVHPYPRE RGQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.2 | 1e-21 | MYB_related family protein |