PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60254.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 558aa MW: 61798.6 Da PI: 6.319

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.1e-30	269	327	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ PON60254.1 269 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 327 8*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MRREKEKEIN MEIDLSLKID AKEEEEEEES KEEEDYDDRD DKKLMIKAVG HDQDQPTIAH 60 VQNNKEAGHG EEEDEASVVE SLQENMKSDK LSTLQMEMNR MKEENNVLRK VLEQTMKDYY 120 DLQIKFAAVH QNNNKKDTLA LLSLHDIQQP KNTTASKISD GENYNRKSPS PPSTHESTVG 180 LGESHELGLS LRLQTGTEKL RERDHEEQKH KEEENKEDFT IYNTLVMKNK LQRTDHQLAG 240 ITSHVSSGTP PNRKARVSVR ARCEAATLND GCQWRKYGQK IAKGNPCPRA YYRCTVAPGC 300 PVRKQVQRCL EDMSILITTY EGTHNHPLPV GATAMASTAS AAAASFMLLD LSNHHSDHGS 360 TSNFTQGTLH NYSTISPQML INPMSHYSSS IRTINPNDPS KGIVLNLTNN TPQFPLPNPS 420 PLLSSSDHQP ISNNFSWNVP SKLPTYTTSG ANNSVTGGLL AASTKGLDEW VWRGEEKTSM 480 AENVTAIASD PKFRVAVAAA ITSLISKESH ITSTNPVGSS ASTLDHPKDG ESSGNGSSSN 540 NWVLDTLSTN GKAIRQKP

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MRREKEKEIN MEIDLSLKID AKEEEEEEES KEEEDYDDRD DKKLMIKAVG HDQDQPTIAH  60
VQNNKEAGHG EEEDEASVVE SLQENMKSDK LSTLQMEMNR MKEENNVLRK VLEQTMKDYY  120
DLQIKFAAVH QNNNKKDTLA LLSLHDIQQP KNTTASKISD GENYNRKSPS PPSTHESTVG  180
LGESHELGLS LRLQTGTEKL RERDHEEQKH KEEENKEDFT IYNTLVMKNK LQRTDHQLAG  240
ITSHVSSGTP PNRKARVSVR ARCEAATLND GCQWRKYGQK IAKGNPCPRA YYRCTVAPGC  300
PVRKQVQRCL EDMSILITTY EGTHNHPLPV GATAMASTAS AAAASFMLLD LSNHHSDHGS  360
TSNFTQGTLH NYSTISPQML INPMSHYSSS IRTINPNDPS KGIVLNLTNN TPQFPLPNPS  420
PLLSSSDHQP ISNNFSWNVP SKLPTYTTSG ANNSVTGGLL AASTKGLDEW VWRGEEKTSM  480
AENVTAIASD PKFRVAVAAA ITSLISKESH ITSTNPVGSS ASTLDHPKDG ESSGNGSSSN  540
NWVLDTLSTN GKAIRQKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	3e-57	WRKY family protein