PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON60006.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 354aa    MW: 38462.2 Da    PI: 10.0706
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON60006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.11e-13120165247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+  ++ + ++lG+g+W+ Ia    ++Rt+ q+ s+ qky
       PON60006.1 120 KPWTEEEHRTFLTGLNKLGKGDWRGIATQYVTTRTPSQVASHAQKY 165
                      58*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MAKEQARKCS HCGKNGHNSR TCNNINNNNN VNVVHGNRIN GNNVDGGNVF KLFGVTIMEK  60
GGTDSMKKSL SMDNLAACAR GGAGHGNDVV PGVDHEAGYL SDGLIHNKRR KAAHERKRGK  120
PWTEEEHRTF LTGLNKLGKG DWRGIATQYV TTRTPSQVAS HAQKYFLRQV PSNDKKKRRT  180
SLFDMTFEKE DHLASHPYAE TSSKAGTPLV LAENNHAQKL PSEVLNRFPH LCLDNYPALV  240
PPTATSNYQL LPHGMGMPGN VQPWPVINFG GPSYLYSNIH PRVYGKVESC DPVVGTHPSG  300
IPPPRSPPSS PSKAARGASS ADQRDGLDLK IGQPQSKQSS ELSSPSSGPI IRVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175179KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.17e-57MYB_related family protein