PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59796.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 435aa MW: 47874.9 Da PI: 10.0392

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.3e-05	202	224	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F +nL+ H+ + H PON59796.1 202 SCPECGEIFMKAENLELHQAVrH 224 8******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSSAMAKSKN QKKPTKQTRH KSQKLESQKA EKPPSWAVVR GLLTCKHSQA QQQEQQKQQP 60 QQKQKQKPKP KQKQKQEQAM EETVKKSKKM KCSGSLCSNT KVMHRPETGS PELQKKRASM 120 GSTFTNNEAS NRSSSMKGPS HELNGVVSTS SSSISVSSNS SVGGSFRGMP FRRFSGCYEC 180 RMVVDPVLGF TRDPSLRGSI CSCPECGEIF MKAENLELHQ AVRHAVSELG PEDTSKNIVE 240 IIFQSSWLKK QAPICKIDRI LKVHNTQKTI TKFEEYRDAI KAKATKLPKK HPRCIADGNE 300 LLRFHCATFM CSLGLNGSSN LCNSIQQCNV CSIIKNGFRV AGEPTGEVAG NGILTTATSG 360 RAHDNAGAAP ENGGEKRAML VCRVIAGRVK KNMEGSMEEY DSVAGEVGVY SNLDELYVFN 420 PKAILPCFVV IYTGF

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSSAMAKSKN QKKPTKQTRH KSQKLESQKA EKPPSWAVVR GLLTCKHSQA QQQEQQKQQP  60
QQKQKQKPKP KQKQKQEQAM EETVKKSKKM KCSGSLCSNT KVMHRPETGS PELQKKRASM  120
GSTFTNNEAS NRSSSMKGPS HELNGVVSTS SSSISVSSNS SVGGSFRGMP FRRFSGCYEC  180
RMVVDPVLGF TRDPSLRGSI CSCPECGEIF MKAENLELHQ AVRHAVSELG PEDTSKNIVE  240
IIFQSSWLKK QAPICKIDRI LKVHNTQKTI TKFEEYRDAI KAKATKLPKK HPRCIADGNE  300
LLRFHCATFM CSLGLNGSSN LCNSIQQCNV CSIIKNGFRV AGEPTGEVAG NGILTTATSG  360
RAHDNAGAAP ENGGEKRAML VCRVIAGRVK KNMEGSMEEY DSVAGEVGVY SNLDELYVFN  420
PKAILPCFVV IYTGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-104	C2H2 family protein