PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59701.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 400aa MW: 43652.9 Da PI: 5.5026

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.2	8.4e-13	59	115	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ ++k+ + g ++++e Aa+ ++ a++k++g PON59701.1 59 SIYRGVTRHRWTGRFEAHLWDkSSWNNvQNKKGRQGAYDSEEAAARTYDLAALKYWG 115 57*****************777799988888********************98 PP
2	AP2	51.8	2e-16	158	210	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g+ PON59701.1 158 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYKTQEEAAAAYDMAAIEYRGA 210 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MKRSPSSSCS SSSSSSCAEP HEIPQVESEK PKGKRARKEN GGRENGKSGQ NSASGRRSSI 60 YRGVTRHRWT GRFEAHLWDK SSWNNVQNKK GRQGAYDSEE AAARTYDLAA LKYWGPTTTL 120 NFPIDSYTKE REEMEKATKE EYLASLRRQS SGFSRGVSKY RGVARHHHNG RWEARIGRVF 180 GNKYLYLGTY KTQEEAAAAY DMAAIEYRGA NAVTNFDISN YIGRIKDKNG QSILIPTAET 240 EPESPPPPSP PPPEKEESAV SSGENLECHQ LLPCLDSSTM AAVMIDSPVD HELSPWSFLD 300 TGFVHLPLPD LPMEKPGELL DLFDNTGFED NIDLIFGSGS GSGSGDSSED DFAGVFDKLD 360 NGNGGSGNVK EDVNGGRDQM GSFSSSSPSS SLTATSVSCM

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MKRSPSSSCS SSSSSSCAEP HEIPQVESEK PKGKRARKEN GGRENGKSGQ NSASGRRSSI  60
YRGVTRHRWT GRFEAHLWDK SSWNNVQNKK GRQGAYDSEE AAARTYDLAA LKYWGPTTTL  120
NFPIDSYTKE REEMEKATKE EYLASLRRQS SGFSRGVSKY RGVARHHHNG RWEARIGRVF  180
GNKYLYLGTY KTQEEAAAAY DMAAIEYRGA NAVTNFDISN YIGRIKDKNG QSILIPTAET  240
EPESPPPPSP PPPEKEESAV SSGENLECHQ LLPCLDSSTM AAVMIDSPVD HELSPWSFLD  300
TGFVHLPLPD LPMEKPGELL DLFDNTGFED NIDLIFGSGS GSGSGDSSED DFAGVFDKLD  360
NGNGGSGNVK EDVNGGRDQM GSFSSSSPSS SLTATSVSCM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-104	AP2 family protein