PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON59505.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 310aa    MW: 34908.6 Da    PI: 7.5849
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON59505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.6e-05138157120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 ++C+ C+k+F+r  n++ H+
  PON59505.1 138 FSCSVCNKTFNRYNNMQMHM 157
                 89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MHTPSTSISS ITSFSYICSN NNTARLVEAD NQEQLGHEDS IFLSLGPPGQ QNNVLKHYEP  60
TFHQTSSSSN QPHRNHIQSS KHSSATSTRE KDGVTVALHI GPSDSGLHHI INNNETQTDE  120
AQYWIPSAAQ IVVGPTQFSC SVCNKTFNRY NNMQMHMWGH GSQYRKGPES LRGTKPASSM  180
LRLPCYCCAE GCKNNIEHPR ARPLKDFRTL QTHYKRKHGA KPFGCRKCAK PFAVRGDWRT  240
HEKNCGRLWF CICGSDFKHK RSLKDHVRAF GNGHAPHALE FCEVEGEEGE EDNDDDNEER  300
ENDNPGSVVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.11e-120C2H2 family protein