PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59209.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 455aa MW: 50255.9 Da PI: 6.0406

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	25	47	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk Fs+ L H r H PON59209.1 25 HVCTICGKGFSSGKALGGHKRFH 47 79**************9999988 PP
2	zf-C2H2	15.3	5.7e-05	87	107	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk F++ L H+r+H PON59209.1 87 CCVCGKDFPSTKALSGHMRSH 107 99******************9 PP
3	zf-C2H2	14.3	0.00012	314	336	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+ksFs+ L H +tH PON59209.1 314 YKCSSCDKSFSTFQALGGHRSTH 336 9***************9999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MEKEEQVFIN GGSSYLEVND PLLTHVCTIC GKGFSSGKAL GGHKRFHIQT ERRAAASTPD 60 ECINGHFKTM KAKNPNMKDA ATNENLCCVC GKDFPSTKAL SGHMRSHPER EWRGIQPPMM 120 LASERISCSH DAQKPKSDDD DDAADDDDDD DDEGEADDDY DHDINKTMST AAITAVDLSE 180 IIPPSWSKTD RRGRTVNPAV AAADGLLNLS RSGDLWLLKK KKKLKVRAVS EKGTLLRFST 240 TTTTCGIDTC NSEEKHVLFN DQPCDVRAMK KKKIKYCSEE KKRKSASVSG SIESDQENVS 300 NKKVSTSTTT TNLYKCSSCD KSFSTFQALG GHRSTHNKDN YKKSSTTSKK EFQVVETVYS 360 KLTNICGEIE DKKFSNATTA EDSEMHHVRS HDVTLPTELA DPSMTMTDDD QIASSSEVDL 420 LGGNRCTTKA TTRRVLEFDL NELPNCVMVG NEEQS

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MEKEEQVFIN GGSSYLEVND PLLTHVCTIC GKGFSSGKAL GGHKRFHIQT ERRAAASTPD  60
ECINGHFKTM KAKNPNMKDA ATNENLCCVC GKDFPSTKAL SGHMRSHPER EWRGIQPPMM  120
LASERISCSH DAQKPKSDDD DDAADDDDDD DDEGEADDDY DHDINKTMST AAITAVDLSE  180
IIPPSWSKTD RRGRTVNPAV AAADGLLNLS RSGDLWLLKK KKKLKVRAVS EKGTLLRFST  240
TTTTCGIDTC NSEEKHVLFN DQPCDVRAMK KKKIKYCSEE KKRKSASVSG SIESDQENVS  300
NKKVSTSTTT TNLYKCSSCD KSFSTFQALG GHRSTHNKDN YKKSSTTSKK EFQVVETVYS  360
KLTNICGEIE DKKFSNATTA EDSEMHHVRS HDVTLPTELA DPSMTMTDDD QIASSSEVDL  420
LGGNRCTTKA TTRRVLEFDL NELPNCVMVG NEEQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	224	LKKKKKL
2	270	284	KKKKIKYCSEEKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	2e-17	C2H2 family protein