PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59105.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 753aa MW: 81139 Da PI: 6.6782

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35	3.6e-11	305	361	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PON59105.1 305 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 361 57*****************4444.2455535555.779999************98 PP
2	AP2	46.6	8.8e-15	404	455	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON59105.1 404 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 455 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MGSMNWLGFS LSPQEPHHHH HHDHQDHSQS TVSHGRLGGF NSDEISGNDV SGAECFDLTS 60 DSTAPSLNQL PPPFGILEAF NRSNNHSQDW NNMNSVSETN YKTSSSDLSM LMGGNQSHQH 120 EPKLENFLGR HSFADHDHHH TYSTNGTADY MFPAINVPSE AAAAAEAANN NGSASGGGNN 180 NNGSSIGLSM IKTWLRNQPA PTQPGETAKN VDGGGGAGAT SSHQALSLSM STGSQSSSAL 240 PLLTAGGGCG GDSSSLSDSS NKQPRTTTTM TTTTAATTTG GLDSQTTAIE AVPRKSIDTF 300 GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQTRKGRQG GYDKEEKAAR AYDLAALKYW 360 GTTTTTNFPI SNYEKELEEM KHMTRQEYVA SLRRKSSGFS RGASIYRGVT RHHQHGRWQA 420 RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDMSRYDVK SILESSTLPI 480 GGAAKRLKDV EQAEMTVDGQ RTDVDDTMSS QLTDAISNYG AAAAAAHHGG WPTLAFQQAH 540 HQPFTMHNYP YGQRLWCKQE VQDSDTHSGF HDSGLHRQLQ LGNTHNFFQP NSSVLHNLMG 600 MDSSSMEHSS GSNSILYSDG GSGDHHGNGV GYGNGTGGYV VPLATVISND VVGNQSQGHN 660 SNNSSSMNNG FGDHENVFIG SSITNTDPYS HARSLYYLSQ QSQVGVVKAS STAYDQGSAC 720 SNNWVPTAVP TFGSRSNINM AAAVPTFTVW NDT

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MGSMNWLGFS LSPQEPHHHH HHDHQDHSQS TVSHGRLGGF NSDEISGNDV SGAECFDLTS  60
DSTAPSLNQL PPPFGILEAF NRSNNHSQDW NNMNSVSETN YKTSSSDLSM LMGGNQSHQH  120
EPKLENFLGR HSFADHDHHH TYSTNGTADY MFPAINVPSE AAAAAEAANN NGSASGGGNN  180
NNGSSIGLSM IKTWLRNQPA PTQPGETAKN VDGGGGAGAT SSHQALSLSM STGSQSSSAL  240
PLLTAGGGCG GDSSSLSDSS NKQPRTTTTM TTTTAATTTG GLDSQTTAIE AVPRKSIDTF  300
GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQTRKGRQG GYDKEEKAAR AYDLAALKYW  360
GTTTTTNFPI SNYEKELEEM KHMTRQEYVA SLRRKSSGFS RGASIYRGVT RHHQHGRWQA  420
RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDMSRYDVK SILESSTLPI  480
GGAAKRLKDV EQAEMTVDGQ RTDVDDTMSS QLTDAISNYG AAAAAAHHGG WPTLAFQQAH  540
HQPFTMHNYP YGQRLWCKQE VQDSDTHSGF HDSGLHRQLQ LGNTHNFFQP NSSVLHNLMG  600
MDSSSMEHSS GSNSILYSDG GSGDHHGNGV GYGNGTGGYV VPLATVISND VVGNQSQGHN  660
SNNSSSMNNG FGDHENVFIG SSITNTDPYS HARSLYYLSQ QSQVGVVKAS STAYDQGSAC  720
SNNWVPTAVP TFGSRSNINM AAAVPTFTVW NDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-123	AP2 family protein