PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON58843.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 366aa    MW: 40687.2 Da    PI: 9.7979
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON58843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix67.72.3e-2165155186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                 +W+++e++aLi+ +r+++ +lrrg+lk+++W+ev++++     +    ++++qC++k+e+l+kry+ + +++++   s+ +s++++f++++
  PON58843.1  65 CWSHDETMALIDSYRDKWYSLRRGNLKATHWQEVADAVsarcPSASPAKTAVQCRHKMEKLRKRYRTELQRARSLpVSRFTSSWVHFKRMD 155
                 8********************************99999666566677899************************97799***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MASPSSPPES PPPPGPPQAV PLAIPAPPLQ LSPSAQAQST ALVVQAQAQP QPTPSSSSRR  60
LPPPCWSHDE TMALIDSYRD KWYSLRRGNL KATHWQEVAD AVSARCPSAS PAKTAVQCRH  120
KMEKLRKRYR TELQRARSLP VSRFTSSWVH FKRMDSMEKG PTAKPENSDS PGEEEDHENE  180
EEDEDQDQQL YEELKYGSNM KSMSKLYRNG VGGSGGGGSS SSGFRIRIPT GVSIAQPGTK  240
AYAKVDPKYG MHPNSMNSGP SFGTKVVREC NAARPGLGKR EREREREKEK DPVVAMVSAI  300
KALGDGFVRM EQMKMEMARE IETMRMEMEM KRTEMILESQ QRIVEAFAKA VSEKKKKTKR  360
MPSPEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-73Trihelix family protein