PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58203.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 503aa MW: 54935.9 Da PI: 9.7791

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.7	4.8e-12	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a +++ + Wk+I + +g +t q++s+ qky PON58203.1 60 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 104 789***************77.*****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MVSKNPNPPE GFYLDPTAMA LPGLGPFAAV TATATTASTT SSSEDLSKKI RKPYTITKSR 60 ESWTEPEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK SGTSEHLPPP 120 RPKRKAAHPY PQKASKNSQA PALLQVPGAF QSSSALLEPG HIQMPDSLRS PSAGAAISSW 180 TNNSVQTVNL SNGTKAAAPS AANNCCSSTE STPGARPIGE TTDLGNHSHQ LRVLPDFAQV 240 YGFIGSVFDP NATGHLQKLK KMDQIDVETV LLLMRNLSIN LTSPDFEDHR RLLASYEIES 300 GTTNHSDAIR TFNDDQLKNV AKIIIPEKNR KEICKYLFQE GVCYAKKDYN LPKHPEIDVP 360 NLQVIKLMQS FKSKEYVRET FAWMHYYWYL TNEGIEHLRT YLNLPSEIVP ATLKKSAKPP 420 SRPFGGPPGD RPRGPSRFEG GSRFGDRDGY RGGPRGPSGD FAGDKGGAPA DFQPSFRGAG 480 GRPGFGRGGG GGYGAAPPSS SFS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MVSKNPNPPE GFYLDPTAMA LPGLGPFAAV TATATTASTT SSSEDLSKKI RKPYTITKSR  60
ESWTEPEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK SGTSEHLPPP  120
RPKRKAAHPY PQKASKNSQA PALLQVPGAF QSSSALLEPG HIQMPDSLRS PSAGAAISSW  180
TNNSVQTVNL SNGTKAAAPS AANNCCSSTE STPGARPIGE TTDLGNHSHQ LRVLPDFAQV  240
YGFIGSVFDP NATGHLQKLK KMDQIDVETV LLLMRNLSIN LTSPDFEDHR RLLASYEIES  300
GTTNHSDAIR TFNDDQLKNV AKIIIPEKNR KEICKYLFQE GVCYAKKDYN LPKHPEIDVP  360
NLQVIKLMQS FKSKEYVRET FAWMHYYWYL TNEGIEHLRT YLNLPSEIVP ATLKKSAKPP  420
SRPFGGPPGD RPRGPSRFEG GSRFGDRDGY RGGPRGPSGD FAGDKGGAPA DFQPSFRGAG  480
GRPGFGRGGG GGYGAAPPSS SFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52660.2	1e-111	MYB_related family protein