PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57626.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 411aa MW: 46436.5 Da PI: 5.6298

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.6	1.4e-27	287	371	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev+aLi++r+ +e++++ +++k+ Wee+s m++ g++r++k+C+ekw+n+nk++kk +e+++kr s+ +tc yf++l+ PON57626.1 287 RWPEAEVRALIALRNAVEHKFQLACSKGSTWEEISVSMHSLGYNRTAKKCREKWDNINKYFKKSRESANKR-STYGKTCLYFQNLD 371 8*******************************************************************8.677789***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MEVIAGDRQI PNTDEFPQLI PPFPEPTDDL IYAHPTAVIH PPDVIKHHRP ISPPHKLRPI 60 RYHARSPVAD FPDHGTLGKG FLGHHAGEVD GELESAVKLE AVEAPKISND VCTVSEMMNC 120 PIGFGSGMFL EGWELNGEEH VVLENESGSS SDDGVDCSAA NLKGPMNRKR RKSTTNLEHF 180 LENLVMKVME KQEQMHNQLI EMIEKMEKER IMREEAWKQL EIERTKRDEL VRAQETSRSL 240 AFITFLENML GEEIQIPEPV VREPCMEGNG VEIDTQADTK CDPNSKRWPE AEVRALIALR 300 NAVEHKFQLA CSKGSTWEEI SVSMHSLGYN RTAKKCREKW DNINKYFKKS RESANKRSTY 360 GKTCLYFQNL DLLYKNGLAN TGIGGTFVSN SVTNNGVEAR SEKDSESLYS V

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MEVIAGDRQI PNTDEFPQLI PPFPEPTDDL IYAHPTAVIH PPDVIKHHRP ISPPHKLRPI  60
RYHARSPVAD FPDHGTLGKG FLGHHAGEVD GELESAVKLE AVEAPKISND VCTVSEMMNC  120
PIGFGSGMFL EGWELNGEEH VVLENESGSS SDDGVDCSAA NLKGPMNRKR RKSTTNLEHF  180
LENLVMKVME KQEQMHNQLI EMIEKMEKER IMREEAWKQL EIERTKRDEL VRAQETSRSL  240
AFITFLENML GEEIQIPEPV VREPCMEGNG VEIDTQADTK CDPNSKRWPE AEVRALIALR  300
NAVEHKFQLA CSKGSTWEEI SVSMHSLGYN RTAKKCREKW DNINKYFKKS RESANKRSTY  360
GKTCLYFQNL DLLYKNGLAN TGIGGTFVSN SVTNNGVEAR SEKDSESLYS V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	3e-44	Trihelix family protein