PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON57512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 20930.1 Da PI: 5.069 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.1 | 3.2e-16 | 21 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+G+r ++ +g+Wv+eIr+p++ ++r++lg+f +e+Aa+a++ a+++l+g PON57512.1 21 PRYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPMPEMAAAAYDVAALALKG 70 68****9.55.6*********843...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MASSSSSSST TTTTSSSKKH PRYRGIRCRS GKWVSEIREP RKTTRIWLGT FPMPEMAAAA 60 YDVAALALKG SEAVLNFPNS MGNYPVPASA SAGDIRSAAT AAAAFKKAEL AALEARRQQT 120 RDNDDDQTTP FDDDDDHHHH GHEFMDEEAL FSMPNLLVEM AEGMLLSPPR MSSPPSEESP 180 GSSDGGESLW GYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 5e-33 | ERF family protein |