PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57494.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 406aa MW: 42371.5 Da PI: 7.2385

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.9	2.2e-35	107	209	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssgkaaksaa 95 a+++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a ++ + s + n+s ++ ++aa PON57494.1 107 ATRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVsvggtLKIPTTSGT-NHS--EETTAAA 202 7899************************************************************8888855543322111111111.111..1111221 PP TCP 96 kskksqk 102 kk+++ PON57494.1 203 AVKKRKR 209 2222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MTSYQDQDDD GGSSDLSNSA GEPEKHHTSE NDNGVSRTTQ NFDETSAFQV MPLKEEPIES 60 DPPSDSDQRA QPLTAQQSVA AAGPIRVVPV AMQMSMPLSM PMPVSTATRR SSTKDRHTKV 120 EGRGRRIRIP ATCAARIFQL TRELGHKSDG ETVRWLLEHA EQAIIEATGT GTVPAIAVSV 180 GGTLKIPTTS GTNHSEETTA AAAVKKRKRP SNSEFVDIND AVSQSSGLAP VGPVTPAVPQ 240 GLVPVWAVGN AGMMVPATAG MMVPTNAFWM FPPTAAGGPG PSSQQPQIWA LSPTVAPVFN 300 MAARPISSFV ANQPVGVGTP PGGVDVRASL YPSGLSNSAA NTSSVGPKAA KKASSTMVPS 360 LSSSSGVGGA GSKAQMLRDF SLEIYDKQEL QFMGRSGNHQ TQSSKP

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MTSYQDQDDD GGSSDLSNSA GEPEKHHTSE NDNGVSRTTQ NFDETSAFQV MPLKEEPIES  60
DPPSDSDQRA QPLTAQQSVA AAGPIRVVPV AMQMSMPLSM PMPVSTATRR SSTKDRHTKV  120
EGRGRRIRIP ATCAARIFQL TRELGHKSDG ETVRWLLEHA EQAIIEATGT GTVPAIAVSV  180
GGTLKIPTTS GTNHSEETTA AAAVKKRKRP SNSEFVDIND AVSQSSGLAP VGPVTPAVPQ  240
GLVPVWAVGN AGMMVPATAG MMVPTNAFWM FPPTAAGGPG PSSQQPQIWA LSPTVAPVFN  300
MAARPISSFV ANQPVGVGTP PGGVDVRASL YPSGLSNSAA NTSSVGPKAA KKASSTMVPS  360
LSSSSGVGGA GSKAQMLRDF SLEIYDKQEL QFMGRSGNHQ TQSSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-64	TCP family protein