PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57192.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 620aa MW: 69696.5 Da PI: 5.8964

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.2	1.3e-12	61	129	1	64
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkG 64 f k+ltpsd++++g +++pk++a+e+ + ++ ++l+ +d++g +W +++iyr++++r++lt+G PON57192.1 61 FSKTLTPSDTSTHGGFSVPKRHADECfpkldmlQ--QPPVQELVAKDLHGFEWHFRHIYRGQPKRHLLTSG 129 88***************************654..444458*************************99 PP
2	Auxin_resp	89.7	5.2e-30	168	250	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a h++st++ F+v+Y+P++s++eF++++++++k++++ + +G++f + fe+e+ e+rlsG++vgv+d d +rWp S+Wr+Lk PON57192.1 168 ALHSISTGTLFTVYYRPWTSPAEFIIPCDEFMKSTENDYLPGTKFGFVFEGEEYIEKRLSGIIVGVEDHDGMRWPSSEWRCLK 250 6799*****************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MPIYNLPSKI LCKVVYIELK AEAQTDEVFA QITLLPLTED ELSSEDEDIL PMPQRTRVFS 60 FSKTLTPSDT STHGGFSVPK RHADECFPKL DMLQQPPVQE LVAKDLHGFE WHFRHIYRGQ 120 PKRHLLTSGE NGELRVGVHH AMKRRTPNNV STSVISGHSM QHGILASALH SISTGTLFTV 180 YYRPWTSPAE FIIPCDEFMK STENDYLPGT KFGFVFEGEE YIEKRLSGII VGVEDHDGMR 240 WPSSEWRCLK VQWDAQLNTT MLPGRLSPWN IKPVDSTNKT ETVVRPPPKR GHELDLPTPG 300 FSSLAREGLL LNRVKRTPQR HKEVLQGQET SDIRGHESGV RIQTISPRYI LPPDPDWKQT 360 QLQFENQLHF PCYQCPGEEI PFPGETRVTT GLTNPCCSTF ATYGVCESVA FTGSFSVSNG 420 NSSNSESQEC TAFKQRSDDI APRYPNGCDK YMLFGVNLFH SHPELPSPQV ATSSELLSTF 480 SFPPTSQSSS VSEPVQVSDT SKSVSDVVLE KQCKQCCSIS NRSCTKVLKH GTALGRSVDL 540 THFDGYEELI SELDQMFDFK GSLTDGSSEW QVTYMNDEGD WILVGDYEWQ AFRSAVRRMI 600 ICPKDEINKL NPGSLNPVSI

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MPIYNLPSKI LCKVVYIELK AEAQTDEVFA QITLLPLTED ELSSEDEDIL PMPQRTRVFS  60
FSKTLTPSDT STHGGFSVPK RHADECFPKL DMLQQPPVQE LVAKDLHGFE WHFRHIYRGQ  120
PKRHLLTSGE NGELRVGVHH AMKRRTPNNV STSVISGHSM QHGILASALH SISTGTLFTV  180
YYRPWTSPAE FIIPCDEFMK STENDYLPGT KFGFVFEGEE YIEKRLSGII VGVEDHDGMR  240
WPSSEWRCLK VQWDAQLNTT MLPGRLSPWN IKPVDSTNKT ETVVRPPPKR GHELDLPTPG  300
FSSLAREGLL LNRVKRTPQR HKEVLQGQET SDIRGHESGV RIQTISPRYI LPPDPDWKQT  360
QLQFENQLHF PCYQCPGEEI PFPGETRVTT GLTNPCCSTF ATYGVCESVA FTGSFSVSNG  420
NSSNSESQEC TAFKQRSDDI APRYPNGCDK YMLFGVNLFH SHPELPSPQV ATSSELLSTF  480
SFPPTSQSSS VSEPVQVSDT SKSVSDVVLE KQCKQCCSIS NRSCTKVLKH GTALGRSVDL  540
THFDGYEELI SELDQMFDFK GSLTDGSSEW QVTYMNDEGD WILVGDYEWQ AFRSAVRRMI  600
ICPKDEINKL NPGSLNPVSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	1e-105	ARF family protein