PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57149.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 605aa MW: 66047.5 Da PI: 9.0961

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H PON57149.1 105 FVCEICNKGFQRDQNLQLHRRGH 127 89*******************88 PP
2	zf-C2H2	15.3	5.7e-05	181	203	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ PON57149.1 181 WKCDKCSKKYAVQSDWKAHQKTC 203 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MSNITGEEAG SFSSGDQEVV QENKQKQLQN HHFHGSNSGI PSGTASTNSN DSSSQQQQQP 60 APKKKRNLPG TPGNIRIIII SIMIVYPNAE VVALSPTTLM ATNRFVCEIC NKGFQRDQNL 120 QLHRRGHNLP WKLRQRTTTE VKKRVYICPE PSCVHHNPAR ALGDLTGIKK HFSRKHGEKK 180 WKCDKCSKKY AVQSDWKAHQ KTCGTREYKC DCGTIFSRRD SFITHRAFCD ALAEENNKVN 240 QGLMNNNNIV PNLSQAQMPD LMPSMPLNNT TSINGLSDFK SVPQELIPMP FKSINNMAAG 300 GMFSSSSGPL FGSPRGLSSP SASSLQLSSN SSSGFNYLQD SKNGSSPVPT AGSAHMSATA 360 LLQKAAQMGA TASNNSINSP MMQKSFVTSM AGPHNNHHDQ LSPAKQAQST YSGVMQLHNN 420 PPYDHHFQSQ PSDQSNMVGI NGGGAFNNNT TSSNPMLSDK SQQEIAQLFD SNGHDMGIYS 480 QIFINGSGPI LEQEDSSTNS GSIHGKIATE RSTTGLSRFA GSGGSSGGGG DRIVVDFMGI 540 GESRPGIGMH EQQQQQQQQR LEHHHHQLEA MRQNRLPQIM NNHPFQQQVS HGDSGIEKSS 600 IWRDI

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MSNITGEEAG SFSSGDQEVV QENKQKQLQN HHFHGSNSGI PSGTASTNSN DSSSQQQQQP  60
APKKKRNLPG TPGNIRIIII SIMIVYPNAE VVALSPTTLM ATNRFVCEIC NKGFQRDQNL  120
QLHRRGHNLP WKLRQRTTTE VKKRVYICPE PSCVHHNPAR ALGDLTGIKK HFSRKHGEKK  180
WKCDKCSKKY AVQSDWKAHQ KTCGTREYKC DCGTIFSRRD SFITHRAFCD ALAEENNKVN  240
QGLMNNNNIV PNLSQAQMPD LMPSMPLNNT TSINGLSDFK SVPQELIPMP FKSINNMAAG  300
GMFSSSSGPL FGSPRGLSSP SASSLQLSSN SSSGFNYLQD SKNGSSPVPT AGSAHMSATA  360
LLQKAAQMGA TASNNSINSP MMQKSFVTSM AGPHNNHHDQ LSPAKQAQST YSGVMQLHNN  420
PPYDHHFQSQ PSDQSNMVGI NGGGAFNNNT TSSNPMLSDK SQQEIAQLFD SNGHDMGIYS  480
QIFINGSGPI LEQEDSSTNS GSIHGKIATE RSTTGLSRFA GSGGSSGGGG DRIVVDFMGI  540
GESRPGIGMH EQQQQQQQQR LEHHHHQLEA MRQNRLPQIM NNHPFQQQVS HGDSGIEKSS  600
IWRDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	2e-93	C2H2 family protein