PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON56434.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ARF
Protein Properties Length: 906aa    MW: 100149 Da    PI: 6.2359
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON56434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.81e-23132233199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  PON56434.1 132 FCKTLTASDTSTHGGFSVPRRAAEKVfppldytQQPPAQ--ELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 226
                 99*****************************96555555..8************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  PON56434.1 227 LLGIRRA 233
                 ****997 PP
2Auxin_resp121.65.7e-40258341183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  PON56434.1 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 341
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 906 aa     Download sequence    
MRLSSLSSSS GFNHQTQEGE KKCLNSELWH ACAGPLVSLP PIGSRVVYFP QGHSEQVAAS  60
TNKEVDAHIP NYPNLPPQLI CQLHNVTMHA DVETDEVYAQ MTLQPLSPQE QKDVYLLPAE  120
LGTPSKQPTN YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDYTQQPPAQ ELIARDLHDN  180
EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLLLGI RRANRPQTVM  240
PSSVLSSDSM HIGLLAAAAH AAATNSRFTI FYNPRASPSE FVIPLAKYVK AVYHTRVSVG  300
MRFRMLFETE ESSVRRYMGT ITGISDLDPV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE  360
IEPLTTFPMY PSPFPLRLKR PWPSGLPSFH ALKDGDMSIN SPMMWLQGGV GDQGLQSLNF  420
QGLGITPWTS MAGLQPDVYQ AMAAAALQEM RAVDPSKCSA QSLLPFQQSQ NVSNGPAALI  480
QRQMLPQSQP QNTFLQSFQE NQAPAQPQLL QQQLQRYHPY NDQRQQQQQQ HQQQQQQQQQ  540
QLQPSQQLHQ LSVQQQIPNV MSALSNFSSG TQSQSPSLQA IPSQCQQPSF PDSVGNPISS  600
SDVSQIHSIL GSLSQNGGSQ LLNLSGSNSV ISSSSLLAKV EPQIPSGAAQ SVLPQVEQLG  660
TPPSNVSDLT TLPPFPGREY SAYQGATDPQ SNLLFGVNID SSSLVMQNGM SNLRNISSEN  720
DSLNMAFGSS SYSSATGTDF PLNLDMTTSS CVDESGFLPS ENGDQVNPPT RTFVKVHKSG  780
SFGRSLDISK FSSYDELRSE LARMFGLEGQ LEDPQRSGWQ LVFVDRENDV LLLGDDPWQE  840
FVNNVWYIKI LSPLEVQQMG KEGLTPASSV PNHKVSNGNN PCDDYVNRQD LRNSSNGIPS  900
MGNLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein